Detail


ID : Ahg913068

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|913068|Al_scaffold_0001_3322
Sequence
ATGGGTTGTA CTGTGAGGGA GAAGCATGTA AAACCGAACC GGAGGATCCG AACCGCTGCT TTTAGATCCG ACCCACCGTT ATGTTTCATC GAGAAGATTG CTCTATCGCA ATCAATTGTT GAGTCAAGTC TCAAAAACTT GGTTTATCAT CCAGGTGTTA CTGATTCTGG TTCTGTCAAT TCGAATTCTG GTAATGAGAA TTTGGAGGAG AATCTTTGGG GTTATTGTAC AGAGGAGCAT TTGGAAGAGA TTTTGCTGAA ACATTTGGAG TTTTTGTATA ATCAAGCTGT TTCGAAGCTT CTCGAATTGG GTTATGAGGA ACGTGTCGCG ATTAAAGCGG TTTTGAGTAA TGGACACTGT TATGGTGAAT TGGATGTTTT GACAAATATA GTGAATAATT CATTATCTTA TTTGAATAGC AGTAGCGGTG GAGGTGGATG TGGCGGTGGT AGTAATAACG GGAACGGTGA GGATCATTCG GAGACTGGTT TTACGGATTT GAGAGATTTG GAGGAGTATT CGCTTGCGGG TATGATTTAC TTGTTGCAAC AAGTTAAGCC TAATTTGAGT AAAGGTGATG CAATGTGGTG TTTGTTAATG AGTGAGCTAC ATGTTGGTAG GGCAAGTACT ATGGATGTCC CTACGAATAG GTCTAGTTGT ACTAAGGAAG ATAGCAATGT AGAAGATGTT GGTAGTGGTA CACTAGATAT TGCTGGTTTT ATGGCACCAG CATTGTGTCG ATTCCATGGA GGTTGGGATT TTGGGAATGG GGTAGGACCT GAGTTTTCTG GTAACGGGTT TTCTATGAAC GGTGCTGAGT TAAAACTGCA GAGAGAGATT GATTGTCCGA AGAGATTTAA TCTTTCGCCA TCCATGAAAT CCTTGTTGAA TCGAAATGTT GCAGCGGTTG CTGCTGGGTA TCGTGCTAGT ATGAAGCAGA AGAAGTCTGA AACTAGTGGT GATAGCTTAT CTTGTAATGA TCCTGCACGT GTGGAGGCTT GTGAGCAGCA GCCACGTAAG TCAGGGAGTG AAGAAAGTGT TAGTTCGGTG TTGGAGAAAT TTCGTGATCT GAACCTTGAT GATAATTTGG AATCGGTGGG TGAGGATGAT AAGGATTGTG TGATCGTCAA TCTGCTTCAT CAGGTTAAGG ATCTCGAGAA GAAACTAAAG GAAAGGAAAG ACTGGGCTCA GAAGAAGGCA ATGCAAGCTG CTCAAAAGGT CAGCGAGGAA TTGGCCGAGC TTAAATCATT GAGTAGTGAA AGAGAAGGAA TCCAACTGCT GAAAAAGGGG AAACAAGCTG TTGAAGAATC AACTGTGAAA AGATTATCTG ACAAAGAAAA TGAACTTAGA AAAGCTAGTG GTCAAAACGA CAGGGCCAAT GCGATTGTAA GAAAGCTTGA GAATCAAAAT GCAGAAATTC GAGCAGAGCG AGAGGGATCC AAATTAAGTG CATCAGAATC GCTTAAAGCG TGCATGGAAG CATCAAAGAA GGAGAAAAAA ATCTTGAAGA AGCTTGTGGC ATGGGAGAAA CAGAAATTGA AGTTGCAGGA TGATATCACA GCTGAAAAAG AAAATATTAA GGCCCTTTAT AGGACTTTAG CTCAGATCAC ACAGGATGAA AAGGAAATTG AGGCGAAATG GAGACAAGAG CAGAAAGCAA AGGAGGACGC TCTGGCTCAA ATGGAGGAAG AACAACGCTC AAAAGAAGCA GCTGAGGGTC ATAACAAGAG AAAGCTGGAG ACTCTACGGT TAAAAATCGA ACTAGACTTC CAAAGACACA AAGACGATCA CCAAAGACTA GAGCAAGAAC TCTCTCGACT CAAAGCCTCT TCAGATACCG ACCCAAGCCA CTTATCCAAC AACGCTTGGA AACCCGAGAA ATCTCAAGGA GAAAACATTG CTAAACTGCT TGAAGAACTT GATAAGCTTG AAGGGTCATA TGACAATGAA GCAAACTACG ATCGAGAATG CATAATCTGT ATGAAAGATG AAGTCTCAGT GGTGTTTCTT CCTTGTGCGC ATCAAGTTGT GTGTGGTAGT TGCAGTGATA GCTTCTTCGC GAGCAACAAT GGCGGAAGCA AAGTCACTTG TCCTTGTTGC CGAGGAAGAG AATTAAAATG TTGCTACAAG GCAAGCATTG ATGGGTTTAG TGCAACAAAG TTCCATGAGC GTTGTGATTT CAAAGGTCCA TGTGTTATCA TAGCTTACAC CAAAGAGAAG TCTTTCAAGT TTGGTGGATT TAGTCCAGAA GGCTATAGAA GTACTGATGA TTATTACGAT ACATTTGATG CTTTCCTCTT CTATTGGCTC GACGATTGCG ATGACCCAAT CGTCCTTTCT AAGGTTGGAG GAAGTGGAGC GGCTCTTTTT GATTATGCAC GTGGAGGGCC TCAATTTGGA GCTGATGGGC TTCTTATCGG ACCGCCTTTA GCTCCTGTGA TGGGTGGATT TGCGGGTCCG GATACGAACT CGGGGATTGG TGATTTGAGG ATGGCTAAAT CAAGATTGGG TTTGTCATAT GCTAAGAGGA AAGATGGGAA AGAATCTATC TTTGGAGATG AAAATAAGGT TAGTCTTGAT GATGTATTGG TCTTTTGTAG CCCTTATATT GCTTCTTTGT ATTAA
Length2625
Protein Sequence
Protein Residue
Map Locationscaffold_1: 14145389.. 14149455
Download Sequence
A.thaliana
AGI-codeAT1G32530.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.63325 Ahg892895 Splicing factor, CC1-like
18.7083 Ahg485837 zinc ion binding
23.5372 Ahg935759 Adenine nucleotide alpha hydrolases-like superfamily protein
28.7228 Ahg918881 Cysteine proteinases superfamily protein
29.0517 Ahg474663 CBS domain-containing protein / transporter associated domain-containing protein
37.4166 Ahg898325 RNApolymerase sigma-subunit C
40.9878 Ahg476408 casein kinase 1-like protein 2
50.3289 Ahg470771 Transcription factor IIA, alpha/beta subunit
51.3809 Ahg492835 Transcription initiation factor TFIIE, beta subunit
51.5558 Ahg349284 Chaperone DnaJ-domain superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression