Detail



ID : Ahg476408

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|476408|fgenesh2_kg.2__1538__AT1G72710.1
Sequence
CCCTTCCCTT TTGGGATATT TTCGCCGCGT GGATTTGATA TGTCGACTCT CTTTCGCCGG AAGTCAATCG GAATCCATCC CTACTTCTTC CTTCTACCCC TTTGATTTTT TTTTTGGCTC TACTTATTAT CTCAGACTTC TCAAATCTTC AGGTCCAATC TCGTCTTCTG TTTGTTTTTT TTTTTCCGGC GAAAGGTAAA GCTCCTGGAT TCTAGTGGTG GATATTAATC GGGTTTCGGT AGTTTAGAAG TAGTTGTAGG TTTTATCAGC TTTCGATTTG ATGGAGCCGC GAGTCGGAAA CAAGTTTCGG CTCGGAAGGA AGATCGGCGG TGGATCATTC GGAGAGATCT ATCTTGGTAT CAATATCCAG ACGAATGAAG AAGTGGCTAT TAAACTTGAA AATGTGAAAA CTAAGCATCC TCAGTTGCTC TATGAATCAA AATTGTACAA AGTACTTCAA GGAGGAACTG GCGTTCCAAA CGTTAAATGG TATGGTGTTG AAGGGGACTA TAATGTCCTC GTGATAGACT TGTTGGGGCC TAGCCTTGAA GATCTATTCA ATTTCTGTAG TAGGAAACTC TCACTAAAGA CTGTACTAAT GCTTGCAGAT CAAATGATCA ATCGCATTGA GTTTGTCCAT CAGAAGTCAT TTCTACATCG GGACATCAAG CCTGACAACT TTCTGATGGG TCTTGGGAGG CGCGCTAATC AGGTATATGT TATCGACTTT GGTCTGGCAA AGAAGTATAG AGACTCAAAT CATCAGCATA TTCCTTACAG GGAAAACAAA AATTTGACTG GAACTGCTAG ATACGCTAGC ATGAACACTC ATCTTGGCAT TGAACAAAGT CGTAGAGATG ATTTGGAGTC ACTTGGATTT GTTCTCATGT ACTTCTTAAA AGGAAGTCTT CCTTGGCAAG GACTGAAAGC TGGAAATAAG AAGCAAAAGT ATGAGAAAAT CAGTGAAAAG AAAGTATCGA CATCTATTGA GGCTTTATGC CGAGGTTATC CATCTGAATT TGCATCTTAT TTCCATTATT GCCGTTCTCT GAGATTCGAC GACAAGCCAG ACTATGCCTA CCTGAAACGG CTTTTCCGTG ACCTGTTTAT TCGTGAAGGA TTCCAGTTTG ATTATGTATT TGATTGGACG ATCTTGAAGT ATCAGCAATC ACAGATTTCT ACTCCTCCTC CTCGTCATCA TGGTCCAGTA GTTGGGCCAA GCTCTGGCCT CCCCCCTGCC ATTACTAGTG CTGAGAGGCC ATCAGGTGGC GACGAAGCTA GACCTTCTGG CTGGTCATCA GGAATCCCTA GACGAAGTTC TGGACAAATT TTTAACTCAG GAAGCTTAGC TAAACAAAAA GCACCAGTTT CAAGTGATCC TGCAATATCT AAAGATGTAG TGTTATCGAG CTCTAGCTTT CTTCGCGCAA CTGGGTCATC AAGACGTGCT GCTGTATCTA GTAGTCGCGA GGCTGCAGTT CTGGGAACCG AGTCTGAGCC ATCAAACCCT CAAATCATTG AAGCTGGATC AGGCTCCAAT TCAAAGATCC CTGTTGGTCG AAGCTCTCCT ATTGTCTCAT CTGAGATCAA CAAGCTATCC TCACCTTCAA GGGCGACTAC TTCAGTCATG AAGAACTATG AGGCTAATCT TAAAGGGATC GAGAGTCTGC ATTTTTAGTC GTTGGGGCCA GTGAATGATC TTGAAACCCC GGGACAAGTG TAAATTAAAA GACAAAAGAA AACCTCTCTT AGGCCCTCCC CATGTTTTAC GTGCATTTGT GTTCACAGGG AGGGAGACTT TACTTGTGCC TGTAAGCACA CACTCAAATA ACAAAGATAA GGAAAAGACT CTGAAGAAGT GATTCCAGAG AAAGACAAAC TCAAATTTAA CACTTTTAGT CCCCATTTG 
Length1909
Protein Sequence
Protein Residue
Map Locationscaffold_2: 14622443.. 14626852
Download Sequence
A.thaliana
AGI-codeAT1G72710.1
Descriptioncasein kinase 1-like protein 2
TAIR curator summaryEncodes a member of the casein kinase 1 protein family that is localized to the cytoplasm and nucleus.
Alias[CKL2][casein kinase 1-like protein 2]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg929544 Adenine nucleotide alpha hydrolases-like superfamily protein
11.225 Ahg476840 eukaryotic translation initiation factor 2 (eIF-2) family protein
13.1909 Ahg475688 microsomal glutathione s-transferase, putative
13.8564 Ahg481487 CTC-interacting domain 7
14.7648 Ahg490677 Papain family cysteine protease
17.7482 Ahg474272 alpha-mannosidase 1
24.2899 Ahg496297 CCT motif -containing response regulator protein
24.3721 Ahg481277 Cytosol aminopeptidase family protein
27.0185 Ahg925857 CLP protease proteolytic subunit 3
28.8444 Ahg928970 cystatin B
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression