Detail



ID : Ahg914712

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914712|Al_scaffold_0001_4966
Sequence
ATGGAGGAGG AATCGCGAGA TATACTGATG TCGACGCTGA CGGAATCTGG GGTTTTGATT CCCGGAGATT TCTCTTCCGT TGGTGAATTT ACTCCGGAGG CGTTAGTATC GATCTCTGCT CAGTTGCTAA ATCTCATTGA CCCATCAGCC TCGTTTTCCG ATGAGCTCCC TGATTCTCTC CCCGAAAGGT TTAGGATCTG CACCGATATT GCCCAGTCTG TGAAGAATCT AGGTTACATC AACGACATGA GTTATTATAA GATGTGTTGC TTGCGGCAGT TTCTGCATCC ATCTGAAGAT GACTCGTATA GGTTGGTTAG GTTTCTGGTT GAGAGGCTTT CGGAGAAAAA TGAAGGAAGA AAAACTTCTA CGGCTGGTGA TATAGCTAGC AGGCCAAAGA TGGAGAATTT CAGAGGTATT TCAGAAGACA TGATGGTGAA GGAGGAAAAG GATGAGACTT TTGATATGCA TATACAGAAG GTTGAAGCTG TCTTAAAAGA TCTTACAATG ACTAGTGAAA TCTCTCATTC ACCTGACTCT CTTGCAAAAA ATACATCAAC CAATGGTTCC GCCATTGTTG ACCTCTTCTC TCAAAACACA GATGATCCTG TTACTGATGT ACCATCGGAT CTTTCTTTGA GAGAGTCATC TGGATATGAA GAAAATCCTT ATGAGGACCC GTCTGCGATA AATTATGAGA CTGTTGAGTT ACAGAATCAA CATAATGTAC TCTTGGAGGA ACTGGAATCT GGATCTTCAG AGCTATACAT TCTTGAAAGC GAGCTGGAGT TGTTGAAGGT GGCTGCGGAG AGGTTATTGG ATGACAAACA GCCGGGTGGG TCATATCTCG AACAGCTTAA TCAACAACTA GTGGTCAAAA GGTGTAATAT CATGGATGTT AAAAGGCAAT GGGACGATGT AAGGCTGACT TTGGAAACTA AAAAGCTACT TCTCTTGGAC CAACTTCATG TGGAGGAGCC AGAGGCTAAA GAGAAATTCC ATCGGTTGAG AAAGACTGAA CTGGATTTAC AATCTCTCTC ATCAGAAATT CAAAAGAGGG AAGATGAACG GTGTAACCTG TACAATGAAC TTGAGAGGCA GCCAAAAGCA GCGCCTCGGA AATCATATAT CCATGGGATT AAAGAAATAA CAAAAAATAG CCGTAAACTG GACACTGATA TTCAGAGGAT TTCAGGGGAG ACCAGGGAGC TACAATTAGA GAGTAACTCA ATCCAAGAAC GCCTGCACCG GTCATATGCT ATTGTGGATG AAATGGTTAC AAGAGAAGTG AAAAAAGACC CAGCAGTACG ACAGGTCTAC AAGCTACTGA CCAGTATCCA CAGTATCTTC GAGCAAATCT CTGAGAAAAT CCTCATGACT GATCGGTTTA GAAGAGAGAC AGTCGATTAT GAAAAGAAGT TGGGGTCCAT CACAGCGCGA GGCATGAGTT TGGAAAAATT AAAAGCCGAT CTGGATGCCA TCAGGAAAGA AAACGAAAGC CTTAAGAAAT AA 
Length1512
Protein Sequence
Protein Residue
Map Locationscaffold_1: 28056288.. 28058572
Download Sequence
A.thaliana
AGI-codeAT1G55830.2
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.088 Ahg492259 conserved peptide upstream open reading frame 12
20.9762 Ahg479191 ubiquitin protein ligase 6
40.8901 Ahg897258 Leucine-rich repeat protein kinase family protein
42.2137 Ahg327739 RING-H2 finger B1A
42.4146 Ahg935374 RING/U-box superfamily protein
46.4758 Ahg475282 vacuolar protein sorting 34
47.7493 Ahg481669 SIT4 phosphatase-associated family protein
55.9911 Ahg943489 Concanavalin A-like lectin protein kinase family protein
64.8537 Ahg489168 Zinc finger, C3HC4 type (RING finger) family protein
70.7672 Ahg496189 DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression