Detail



ID : Ahg916495

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|916495|Al_scaffold_0008_1246
Sequence
ATGGATTCGA ATTCATGGAT CAATTGTCCT CCCGTGTTTT CATCATCGTC TTCTTCACGG CGTTACCAAT CTCGATCAGA TTTGTATTTG GGAGATGTTG AAGGAGAAGA CGATTTGAAA GCAGAGTTTA TGTGTCCGTT TTGTGCAGAT GAGTTTGATA TTGTTGGTCT TTGTTGTCAT ATTGATGTGA ATCATCCTGT GGAGGCTAAG AATGGGGTTT GTCCTGTCTG CACAAAGAGG GTTGGATTGG ACATTGTTGG CCATATTACA ACGCAACACG GGAGCGTATT TAAGGTGCAG CGAAGGAGAA GGTTGCGTAA AGGTGGATAT AGCTCTGCCT ATCTTACGCT TAAAAAGGAG CTTCGAGAAG CTAACTTACA GTCTTTTGGA GGATCTTCCA CTTTCATTCC CTCTTCCAAT ATAGATTCTG ATCCTCTACT CTCATCCTTT ATGTTTAAAC CTCCTTCGGC TATACCCATC GCTGAAGGAG ACTCGTTAGC AATTGTTTCA CCTAAGGACA CCCCTAAAAG CAACATACGA CAAGTATCAC TTTCCATCGA AGATCAAGAG AAGGCGAAAA AGAGCGAGTT TGTGCAGGGC ATGCTTTGGT CTACCATGCT TGAAGACAAC ATCTAA 
Length636
Protein Sequence
Protein Residue
Map Locationscaffold_8: 12203800.. 12205173
Download Sequence
A.thaliana
AGI-codeAT5G49230.1
DescriptionDrought-responsive family protein
TAIR curator summaryIdentified in a screen for mutations hypersensitive to red and blue light. Mutants have shorter hypocotyls. Encodes a nuclear localized protein with similarity to drought induced proteins. Contains a ZZ zinc finger domain which is thought to mediate protein-protein interactions.May be involved in red and blue light signal transduction.
Alias[HRB1][HYPERSENSITIVE TO RED AND BLUE]
Gene coexpression
MR
MR Locus Description
6.40312 Ahg927319 Alpha-helical ferredoxin
16.9411 Ahg925966 Proteasome maturation factor UMP1
28.4605 Ahg488117 RNA helicase family protein
29.5973 Ahg481267
34.1174 Ahg473785 RAB GTPASE HOMOLOG B18
37.2156 Ahg485225 DEK domain-containing chromatin associated protein
45.9565 Ahg478325 Family of unknown function (DUF662)
51.2055 Ahg472093 DNAJ heat shock N-terminal domain-containing protein
63.2851 Ahg922568 Protein of unknown function (DUF616)
66.2495 Ahg946855 FRIGIDA-like protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression