Detail



ID : Ahg919431

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919431|scaffold_100712.1
Sequence
CCAAAAAAAC CCTAGTTTTG AATGGAATCG GCGGATTCCG GGTCACAACG ATCCGATCCG GTAAAAGGAG ACGACACGGG TCCATCTTTC GTCTCTTCGC CACCGGCTAC ACCAAGCAGG TATGAGTCAC AGAAGCGACG TGACTGGAAC ACTTTCTTGC AGTACCTCAA GAACCACAAG CCGCCTCTCG CGTTGTCACG TTGTAGCGGA GCGCACGTGA TCGAATTCCT CAAGTACCTC GACCAGTTCG GCAAGACCAA AGTCCACGTG GCGGCTTGTC CTTACTTCGG CCATCAGCAA CCTCCGTCTC CTTGCTCATG CCCTCTCAAG CAAGCTTGGG GATCTCTCGA CGCTTTGATC GGACGGTTGA GAGCTGCCTA CGAGGAGAAC GGTGGACGGC CTGATTCAAA CCCGTTCGCC GCACGTGCGG TCAGGATTTA CTTAAGGGAA GTCAGAGAGA GTCAGGCCAA GGCTCGAGGG ATTCCTTACG AGAAAAAGAA ACGGAAACGG CCACCAACTG TCACCACCGT TAGAGTTGAC GTCGCTTCTT CGAGACAAAG TGACGGAGAC GCTTGTAACG TCGGTGCTCC ATCTGTTGCC GAGGCCGTAC CGCCTTAGAT CGAATTATAT ATTATAGT 
Length638
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2424695.. 2425330
Download Sequence
A.thaliana
AGI-codeAT1G07090.1
DescriptionProtein of unknown function (DUF640)
TAIR curator summary
Alias[LSH6][LIGHT SENSITIVE HYPOCOTYLS 6]
Gene coexpression
MR
MR Locus Description
23.622 Ahg476384 Protein of unknown function (DUF1677)
25.7876 Ahg479130 translationally controlled tumor protein
29.7489 Ahg926057
32.7261 Ahg489781 Arginase/deacetylase superfamily protein
32.8481 Ahg477533 Peptidase M20/M25/M40 family protein
34.7275 Ahg472278 OPC-8:0 CoA ligase1
38.7298 Ahg476695 cytokinin oxidase 5
39.7995 Ahg926558 fucosyltransferase 13
41.7133 Ahg483019 Subtilisin-like serine endopeptidase family protein
54.3691 Ahg926058
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression