Detail



ID : Ahg919893

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|919893|scaffold_101174.1
Sequence
GTTTCTTCCT TTTTGTTTCA CCAATGGCGA CCTTTATCAA TCTGGAGGAT TCCCCAATGT TTCAGAAACA GGTTTGTTCC TTGGAGGGGA CAGCTGATGA GCTTAAAGAT CGTTGTCAGA AGCTATACAA AGGTGTTAAG AAGTTTATGG GGACTTTGGG AGAGGCATCC AAAGGAGAAA GTGCCTTTGC AGATTGTCTG GAAGAATTTG GAGGTGCACC TGATGATCCT ATCAGTCTTT CAATTGGAGG CCCCGTTATA TCCAAATTTA TAAATTCACT TCGAGAGCTT GCCTCTTATA AGGAGTTTCT TTGCTCACAG GTGGAGCATG TGTTACTCGA GAGGTTGATG AACTTTATTA ATGTTGATCT ACAAGAAGCT AAGGAGTCTC GCCATCGATT TGATAAAGCT GCTCATTCGT ATGATCAGTC GCGCGAAAAG TTTGTGTCTT TAAAGAAGAA TACAAGAGGA GAAATTGTTG CAGAGTTGGA AGAGGATCTG GAGAACTCAA AGTCAACATT TGAGAAGAGC CGTTTCAATC TAGTAAATTC ACTGATGACT ATTGAAGCGA AAAAGAAGTA TGAGTTTTTA GAATCTATAA GTGCAATTAT GGATGCCCAT CTGAGATATT TTAAACTTGG ATATGACTTG TTGAGTCAAC TGGAACCATT TATCCATCAG ATATTAACAT ATGCTCAGCA ATCAAAAGAA CAGTCTAAGA TTGAACAAGA TCGACTAGCA AGACGCATTC AAGAATTCAG GACCCAGTCG GAATTAGACA GCCAACAGCT AGCCGCTAAC GCAGAACCTT CTGGTGTTAA CGGAAACCGT GGTGGGATCC CTTATAAAAA TACCGAAACA AGTTTAACAG CAGACAAGGA AGTAATTAAA CAGGGGTATT TATTAAAGCG TTCGTCAAGT TTGAGAACTG ATTGGAAAAG AAAGTTTTTT GTCCTTGACA GTCATGGCTC CATGTACTAT TACAGAACTA ATGGTAATAA ATCAATGGGA TCTCAGCATC ACTATAGTGG TTCATCTGAC CATAATACTG GCGTATTTGG TCGATTCCGT GCAAGACATA ATCGATCAGG TTCGCTTACT GAGGGCAGCT TAGGCTATAA TACTATTGAC CTCCGCACTT CTTTGATAAA ACTAGACGCA GAAGACATGG ATCTTCGGCT CTGTTTCAGA ATTATTTCTC CTCAAAAAAC TTACACACTT CAGGCTGAAA ATGGAGCAGA TAGGATGGAC TGGGTAAATA AGATCACAAC AGCTATAGGG ACGCTTCTCA ATTCTCATTT TCTACAACAG TCACCAGTGC GATTCTTGGA TAAGAGCAAC ACTAGTTCTG CTCCTGCTAA TGCTGTCGTC TCCGGGGATC AGATTCGACA TAATGATGCA AGACAGAATA TCGGGGATGA TGTCTCAACA ATACTCAGAG GAATTCCGGG AAATAATGCA TGTGCAGAGT GCAATGCTCC TGAGCCCGAT TGGGCATCAT TAAATCTTGG AGTTTTGTTG TGCATTCAAT GCTCTGGTGT TCACAGGAAT CTCGGCGTTC ATATATCCAA GGTGAGATCC CTCTCATTAG ATGTGAAAGT GTGGGAGCCA ACGATCTTGG ACTTGTTTAG AAATTTGGGC AATGTGTACT GTAATTCACT GTGGGAGGGA CTACTTCACC TTGACGATGA CTGCGAAGAC GGATCAGCAA TGTCGCATGC ATCAGTTTCA AAACCATGTC CAGAAGATTC CTTTAGTGTG AAGGAGAAAT ACATTCTAGG AAAGTACCTG GAGAAAGCAT TAGTCGTCAA GGATGAAAGT GAAGCAAAAC CTTCTGCTGC GAGTAGAATA TGGGAAGCTG TTCAAAGCAG AAACATACGA GAAATCTATC GACTGATTGT TACTACTGGG GATGTGAATA TTATCAACAC CAAGTTCGAT GATATAACTG ATATTGATGC ATATCACCAT GTTGATGCAG CAGAGAAAGC AGTAAAGAAA AGACATGACC CAACTGTGTG TCAGAGAATC AAAGAATCCA ACCAAGCAGG AAACTGTCTT CAAGGCTGTT CCTTGCTCCA TGTGGCTTGT CACATTGGTG ACTCTGTCTT GCTTGAACTG TTGTTGCAGT TTGGTGCTGA CCTAAACATA AGAGATTATC ACGGAAGGAC TCCGTTACAC CATTGCATAT CATCTGGGAA CCACAAATTT GCAAAGATTC TACTGCGAAG AGGAGCACGC CCATCGATAG AGGACGATGG AGGGCTAAGC GTGCTAGAGA GAGCGATGGA AATGGGAGCC ATAACTGATG AAGAGCTCTT TCTTCTCTTA GCCGAGTGCG CGTAAACCGA CACTGCACAG CTTCAT 
Length2366
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4114344.. 4121671
Download Sequence
A.thaliana
AGI-codeAT1G10870.1
DescriptionARF-GAP domain 4
TAIR curator summaryA member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes. AGD4 belongs to the Class 1, together with AGD1, AGD2, and AGD3.
Alias[AGD4][ARF-GAP domain 4]
Gene coexpression
MR
MR Locus Description
5 Ahg496646 Inositol monophosphatase family protein
8.3666 Ahg944563 Protein of unknown function (DUF3506)
16.7929 Ahg919553 DNA ligase 1
17.6635 Ahg481240 RING/U-box superfamily protein
18.1659 Ahg473698
19.5959 Ahg354960 transferases, transferring acyl groups
23.0651 Ahg944613 myosin, putative
26.2679 Ahg481405 cellulose synthase 10
26.4953 Ahg923889 P-loop containing nucleoside triphosphate hydrolases superfamily protein
28.5657 Ahg480631 Seven transmembrane MLO family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression