| Annotation |
|---|
| Description | jgi|Araly1|920317|scaffold_101598.1 |
| Sequence |
GATTAATTAG ACTTAAAGAA ATGATGGGTT TCGCGATTTC CGATGAATTT CTGGGGACAT TCGTGCCGAT TCTGGTGTAT TGGGTGTATT CAGGGATGTA CATTTGCTTA GGATCTTTGG ATAAATATAG ATTGCATTCG AAGATAGATG AGGATGAGAA GAATCTCGTT ACCAAATCTG CCGTCGTCAA GGGCGTTCTT CTTCAACAGA CTCTTCAGGC TATTATCTCC GTTATTCTCT TCAAGATAAC AGGAAGTGAT GCAGATGCTG TTACCACGCA GCAATTTTCC ATTCTACTTC TGGCTAGGCA ATTTATCATC GCTATGCTTG TAATTGACAC TTGGCAATAC TTCATTCATC GATATATGCA CCTCAACAAG TTCTTGTACA AGCACATCCA CTCTCAACAT CATCGCCTTG TCGTGCCTTA TTCGTATGGA GCTCTATACA ACCATCCACT AGAAGGTCTT CTCTTGGACA CTATAGGTGG TGCTTTGTCT TTCCTCTTCT CTGGTATGTC CCCAAGAACC GCCATCTTTT TCTTCTCCTT CGCTACCATC AAAACAGTAG ATGATCATTG TGGACTATGG CTTCCGGGAA ATCCATTTCA CATCTTCTTC AGTAATAATT CTGCTTACCA TGATGTTCAC CACCAACTCT ATGGAACCAA ATACAACTTC TCGCAGCCAT TCTTTATTAT GTGGGATAGG ATCCTCGGTA CTTACTTGCC TTATTCACTT GAGAAAAGGG CCAATGGAGG ATTTGAAACA CGGCCAATCA AAGTATCCAA AGATGAGTAA TTTGTCTTTC TTTCTTTTGG GGGCTTCTTG TCACTGCTAA GTCATCATTT GCTCGTTAGA GAACCACTGT AACCTTTGCG TACTTGTAAC TGTACATACA ATTCCAATCT ATCCTTTTTC GATCTGCGGG CAGATGTTTC TGTGTAAGCC AGCAGTAAAT TCATTTTGTA ATAGTCAAAA CTTCTGATCT TCTCTGTTGT TATTATCTGC TTTATAATTC CAGGTTTTGA GACCTGTGA |
| Length | 1039 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 5733733.. 5735448 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G14290.1 |
| Description | sphingoid base hydroxylase 2 |
| TAIR curator summary | Encodes one of the two redundant sphingoid base hydroxylases (SBH). Involved in sphingolipid trihydroxy long-chain base (4-hydroxysphinganine) biosynthesis. Double mutants of SBHs were dwarfed and not able to progress from vegetative to reproductive growth. |
| Alias | [SBH2][sphingoid base hydroxylase 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 21.3307 |
Ahg481491 | Leucine-rich receptor-like protein kinase family protein |
| 30.0998 |
Ahg941132 | chloroplastic acetylcoenzyme A carboxylase 1 |
| 35.8748 |
Ahg917547 | Leucine-rich repeat protein kinase family protein |
| 41.1218 |
Ahg486978 | RHO guanyl-nucleotide exchange factor 7 |
| 42.7785 |
Ahg475890 | alpha-fucosidase 1 |
| 45.7275 |
Ahg477985 | Ribosomal L29e protein family |
| 47.9583 |
Ahg492137 | PLC-like phosphodiesterase family protein |
| 53.4041 |
Ahg932026 | like AUXIN RESISTANT 2 |
| 54.827 |
Ahg476070 | DHHC-type zinc finger family protein |
| 57.7581 |
Ahg922244 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|