| Annotation |
|---|
| Description | jgi|Araly1|477051|fgenesh2_kg.2__2181__AT1G78880.1 |
| Sequence |
GTGTTCTTCA CTTTTTCTTT CCTCAGTTGG TTTGTCCAAA AAAAAAATCT CCACCGCTCT GAGAGAAAAA AAGTGGGAAG AGGAGAGAGA GAGACAACGC ACCAACTGTT ACGGCTCAAA GAGATCTCGA TCGGGATCCA CACGACGGAG ATAGAGATAG AGAGTGAGAG AGCTAACGGA TATGGGATCT CAGCTACTTG AGTGTTGCTT CCGTTTCGTC TTCTACTGTC ACTCCCACAG CTCCAACTGT TTTCCTTGAT ACTCTTTTTC TTTTCTCTCT GTCCATTTCT CATGGATTCT TGTTTTACTC TCTCAGGGAT TTGAAATCCT CACTTTTCAG CACATTCTTT GTGGTGCCCA TCTATTCTCT AGCCAGTTTC GAGTTTCCTG AAGAAATCAA ATGGGTTCAA GATACGCATC CCACCAGCTC AGCAATGGGC TTTTTGTGTC TGGCCGCCCA GAGCAACCCA AAGAAAAGCC TCCAACAATG AGCTCGGTAG CCATGCCATA CACCGGTGGT GATATTAAGA AATCAGGAGA ATTAGGGAAG ATGTTTGACA TTCCGACTGA TGGGACTAAG TCAAGGAAGT CTGGCCCCAT AACTGGAGGA TCTTCAAGAA GTGGTACGCA ATCAGGTCCA GTGCCTAATG CAACTGGTCG TATGTCTGGT TCTTTAGCTT CTGCTGGCTC AAATTCAATG AAGAAAACAA ATTCTGGGCC TTTGTCTAAG CACGGGGAGC CTTTAAAGAA ATCCTCTGGT CCGCAATCCG GTGGTGTAAC AAGGCAAAAT TCCGGCCCTA TTCCTATACT CCCAACTACA GGTCTCATAA CATCTGGGCC AATTACCTCG GGCCCTCTAA ATTCATCTGG GGCTCCTAGG AAAATTTCTG GTCCTCTAGA CTATTCTGGT TCGATGAAGA CACATATGCC TTCAGTTGTC CACAACCAGG CGGTAACTAC CCTTGCTCCG GAAGATGACT TTTCCTGCAT GAAGAGCTTC CCCAAGCCTG TGCTGTGGCT GGTTATACTT ATATTTGTAA TGGGGTTCCT CGCTGGAGGG TTCATTCTTG GAGCAGTTCA CAATGCAATT CTCCTCATTG TTGTTGCGAT CTTGTTCACA GTTGTTGCTG CACTTTTCAT TTGGAATATT TCTTGTGAAA GGCGTGGTAT CACAGATTTC ATTGCTCGTT ATCCTGATGC TGATCTTAGA ACTGCCAAAA ACGGTCAATA TGTGAAGGTC ACTGGGGTGG TCACTTGTGG TAACGTGCCT CTGGAATCAT CCTTCCATAG AGTTCCCAGA TGTGTTTACA CGTCTACTTG TCTATATGAG TACCGTGGAT GGGGTTCAAA GCCAGCCAAT GCTTCACATC GTCGCTTCAC ATGGGGACTG AGATCAGCAG AGAGGCATGT GGTAGACTTC TACATTTCTG ATTTCCAATC TGGGCTCAGA GCATTGGTCA AAACTGGAAA CGGTGCAAAG GTAACACCTC TCGTCGATGA TTCTGTTGTC ATCGATTTTA GGCCAGGGAG TGAGCAAGCC TCTCCAGACT TTGTAAGGTG GTTGGGTAAA AAGAATCTAA CCAATGATGA TCGAATAATG CGGCTTAAAG AAGGGTATAT CAAAGAAGGA AGTACAGTGA GTGTGATTGG AGTGGTTCAG AGAAACGATA ACGTGTTAAT GATAGTCCCG ACGACAGAAC CATTAGCAGC TGGTTGGCAA TGGAGTAAGT GCACATTCCC TGCAAGTCTT GAAGGAATTG TATTGAGATG CGAAGATTCA TCGAACGTAG ACGCAATTCC TGTCTGATGC AGTAGTAGTA AGTCTTTCTT TTGCTTCTTC TTCCACGGTT GGTAGACGAA AATCTCACTG TTCCACTTCG GCTTCATTAA TATTTTTCAT GAAATCTGAA ATGTGTTCTT GGTTGGTGGC TTTTCGCTCT CTCCTGATGA TGATTCCTTT GGTTGGTGGT TTATGGTAGT GTTTTCTTTT TCTTTTCTCT TTTTCCTTTA ATATTTCTTA TTTTTTATAT CGAGTTATTA TTACAGTAGG ATGATAATGA TGATGATGGA TGTGGATTTC TTTTCTACGA CTTAATTTGT GTTGTGGGCA CTCTTCGTTG CCTTTGGTTT GTAATTGTAA AGCTCTGCTA GTAATTCTTT TTTTCGACCT AATTTGTGAT CTAATGTAAT GGGATTATCT TTTTAGTTTG GAATGTACCC GTTGCATGTG GATTGTGTTT ATT |
| Length | 2243 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 17339337.. 17342636 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G78882.1 |
| Description | conserved peptide upstream open reading frame 56 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF56 represents a conserved upstream opening reading frame relative to major ORF AT1G78880.1 |
| Alias | [CPuORF56][conserved peptide upstream open reading frame 56] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5 |
Ahg921503 | ARM repeat superfamily protein |
| 6 |
Ahg920678 | myosin 1 |
| 7.28011 |
Ahg474047 | stomatal cytokinesis defective / SCD1 protein (SCD1) |
| 9.59166 |
Ahg947562 | RING/U-box superfamily protein |
| 10.583 |
Ahg481514 | uroporphyrinogen-III synthase family protein |
| 11.8322 |
Ahg927706 | Flavodoxin family protein |
| 13.9642 |
Ahg471132 | NF-X-like 1 |
| 19.0526 |
Ahg475917 | microtubule-associated proteins 70-1 |
| 19.4422 |
Ahg485660 | KCBP-interacting protein kinase |
| 24 |
Ahg470907 | Plant-specific transcription factor YABBY family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|