Detail



ID : Ahg921297

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|921297|scaffold_102578.1
Sequence
GATTCGAGAG AGAGTCTAAA ATGGAGCACC AAGAAGTTGC TGATTCGAAA ACGGATCCTC TTTGCATTTC TCAATTGAAA ATATCTTCTT CTCTTGACCC ATTGCCACAG GCGAACATGA CAGCGGATTT ATTGAAGAGT CATAGACATT CACCTATAAA AGTGCAAGGG AGTGAAGAAA CTTGGGGAGT AGAAGATGAT GATGACCTCA CTGACCCTAA TTTTGATACC GTTGAGGGCA ATGGACATTC AGATCCAACT AGCTGCTTCG ATGCTGATTT AAGTGAGTAC AAAAAGAAGG CCACGGTAAT TGTGGAGGAA TACTTTGGCA CCAATGATGT TGTCTCAGTT GCTAATGAAC TAAAGGAGCT TGGAATGCCT GAGTACCGTT ATTATTTTGT CAAGAAATTA GTCTCCATGG CTATGGATAG ACATGACAAA GAGAAAGAAA TGGCTGCTTT TCTCCTGTCT ACGCTTTATG CCGACGTCAT TGATCCCCCG GAAGTTTACA GAGGTTTTAA CAAACTGGTG GCTTCTGCTG ATGATTTATC TGTAGATATT CCCGATGCAG TTGATGTTCT TGCTGTCTTT GTGGCTCGGG CAATTGTTGA CGACATTCTT CCACCTGCGT TTCTGAAGAA ACAAATGAAA TTGCTACCAG ATCACTCCAA AGGTGTTGAG GTTTTGAGAA AGGCCGAGAA GAGCTATCTA GCGACTCCGC TTCATGCTGA AGTTGTTGAG AAGAGATGGG GAGGGACTGA TAATTGGACT GCTGAGGATG TGAAAGCAAG AATAAACGAC TTGCTGAAAG AGTATGTGAT GAGTGGAGAC AAAAAAGAAG CTTTTAGATG CATCAAAGGA TTGAAAGTTC CTTTCTTTCA TCATGAGATT GTCAAACGAG CACTGATTAT GGCAATGGAA AGGCGAAAAG CTGAAGTCAG GCTGCTAGAT CTGTTAAAAG AAACGATTGA GGTTGGTCTC ATAAACTCCA CTCAAGTAAC AAAAGGGTTT AGCAGAATCA TTGATTCAAT TGAAGATTTG TCTCTTGACA TACCAGATGC ACGCCGTATA TTACAGTCTT TCATCTCTAA AGCAGCTTCT GAAGGATGGT TATGTGCTTC TTCTCTGAAA TCACTCTCCG CTGATGCAGG AGAAAAGTTA CTTGAAAACT CCAGCGCCAA TGTTTTTAAA GACAAGGCGA AGTCGATCAT CCGAGAGTAT TTCCTTTCAG GTGACACTTC AGAGGTCGTA CATTGTCTAG ACACCGAATT GAATGCATCT TCGAGTCAGC TACGCGCAAT CTTTGTCAAA TATCTGATAA CTCTAGCAAT GGACAGGAAG AAAAGAGAGA AGGAGATGGC TTGTGTGCTC GTCTCTACTC TTGGTTTCCC TCCAAAAGAT GTCAGAAACG CATTCTCGAT GCTCATAGAA TCTGCAGACG ACACGGCTTT GGACAACCCA GTGGTTGTTG AAGACCTTGC CATGTTCTTA GCCAGAGCTG TGGTTGACGA GGTGTTACCT CCACGGGATT TGGAAGAAGT GTTAAACCAG ACTCCCGAGG CAGGCTCAAG TGTGGGAGAG AAAGTGATTC AAATGGCGAA AACATTGCTG AAAGCACGTC TTTCCGGTGA AAGGATCTTA CGTTGCTGGG GAGGAGGAGG AATTGAGACA AACTCGCCAG GATCCACAGT GAAGGAAGTG AAAGAGAAGA TCCAGATTCT TCTAGAAGAG TATGTCTCTG GTGGAGACCT CAGAGAAGCT AGTAGGTGCG TGAAGGAACT GGGAATGCCG TTTTTTCACC ATGAAGTAGT GAAGAAGTCA GTAGTGAGGA TCATAGAAGA GAAGGAGAAC GAGGAACGGT TATGGAAGCT ACTAAAAGTG TGTTTTGATT CAGGACTAGT GACGATATAT CAGATGACTA AAGGGTTTAA AAGAGTTGAT GAATCGCTTG AAGATCTGTC TTTGGATGTC CCTGATGCTG CGAAAAAGTT TTCAAGTTGC GTCGAAAGAG GCAAGCTTGA AGGGTTCTTA GACGAATCAT TCGCTTGTGA GGAATCACAA AGTAAGAAAC AGAACGGCTC GTCTTCTTCG TCTGGATGAT AACATTTGAG CACCAAACCT 
Length2120
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9558753.. 9561024
Download Sequence
A.thaliana
AGI-codeAT1G22730.1
DescriptionMA3 domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg486301 DEA(D/H)-box RNA helicase family protein
6.40312 Ahg942216 chloride channel D
7.34847 Ahg478044 SMAD/FHA domain-containing protein
7.93725 Ahg348635 protein affected trafficking 2
8.30662 Ahg922444 D111/G-patch domain-containing protein
9 Ahg480298 Major facilitator superfamily protein
9.16515 Ahg933239 Ring/U-Box superfamily protein
11.8322 Ahg488300 Isocitrate/isopropylmalate dehydrogenase family protein
12.49 Ahg944727 Regulator of Vps4 activity in the MVB pathway protein
19.7484 Ahg479052 Coatomer, beta' subunit
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression