Detail



ID : Ahg489601

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489601|fgenesh2_kg.6__2735__AT5G27240.1
Sequence
ATGGACTGCA ATAAGGAAGA GGCCTCTAGG GCAAAAACTT TAGCAGAGGA TAAGATGAAG AATGGTGATT TTGTTGGGGC ACAAAAGCTT TTATTGAAGG CTCAGAGTCT TTTCTCAGGT CTTGAGACTT TACCACAAAT GTTAGCCGTA TGTGATGTCC ATAATTCTGC TGAGAAGAAA CTCAACGGTC TTGAGAACTG GTACGGTATT CTTCAAGTTA TGCATTTTGC TGACGATGCT ACAATCAAGA AGCAGGTCAG GAAGCTTGCT TTGCTTCTCC ATCCTGACAA AAATCAGTTC CCTGGTGCTG AGTCTGCTTT CAAGTTGGTT TGGGATGCAA GTAGATTTCT TGCTGACAAG GATAAACGGT CTCAGTATGA TATAAAGCGT AGAATCTATT TACGGGTTGC TAGTTACCAG TTGAATGCAG CAAACTATGG TCTACAATGT GCCAGTGATA GTGTTACATT TTGGACATGT TGTGAGCATT GTGGTTATAG GTATAGATAC TTGATAGAGT ATGCGAATAC TCTTCTGCAA TGTACCAGTT GTCAAAGATC CTACATGGCC TACGACACGG GATTTAATGG AGCATCATTT AAATCAAGCA CTGGTCAGAA AGATGTTCGA AATCAGGGGC CGTGTAACAC ATCTGTGAAT ATAAATGCAG AGTCTACTGG TGCTCAACCA GGAAGTGTAG CAGCTGAGGT GGATAAGAAA GGAACTTTCA ATGAGGAATT CAACAAGAAG AACGGAGGAG GTGAGATCAA AAAGACTCAT GTAAAAAAAC CCAAAAGAAA GGCTGAATCC ATGAAGAGTT ATGCTGAATC AAGTATACCT GAGAAAGACG AGGGAAAGAT GAATAGTGCA GCTAAACTAC AGAAGCCACA ACCTGAGGCT ACAGAACCCG AAATAGGTTT ATCGAAATCT GTACCTGATG AGTCAATTTC AAGGAGTGAT CAAGTACCCT CTACAAGCAA GGACAGGAAC AAGAGGAAAA AGTGTGTTGA GGAGAGTATT AATGTTGATG GTTCTGATAT TGTTAAGGAT AAAGCGGATT CAAATGATAA TAGTAAGTGG AAATCTCCAA GGAGATGCCA ACAGAGTTCT TGGGCAGAGA AGGTAGGCAG TGATGATAGC CCTCCAAAAA AAAGGTCAAG ATCAAATGTT GGGTTAAAAT CTGAGCAAAC TACAAGAAAA GGATTAGTAG GTGTTGGATC ATCTACACGT CGTGATTCTG GTGGTGGTTC AACTGCCCCT TCATGTGTGT TTAATGGAAA AGCTAAGAAA TTCGTGGATT CTGGATATCA AGAAATCTCA GCATCCAAAG ACAAAGTGAG AGAAGGATGT AAAGAAAGTG GAGAAGGGGT GGTTATGGCA GCAAAGATTG ACAATAACCA CAATGCTAAT GAGAAGCTTA TTACGCAGGA TTCGCCTGAT CCAGAGTTCA GTAATTTTGA ACTGACGACA AGCTGTTTTG CTGTCAACCA GGTGTGGTCT TTGTATGATC CGACTGACGG TATGCCTCGG TTGTATGCTC GGATAGAAAA AGTGTTGGAT TCTGAGTTCA AGCTGTGGAT TACATGGATT GACCCGCTAC AGGATAATAA CTCTATTCCC ATTGCTTGTG GAATCTTTCA AGTTGGGGAT TCAGCCGAAG AAAACGACCA CTTAAAATTT TCTAGTCAGA TGTTTCACTT AACTCGCAAC AATAGCATCG GCATATATCC AAGAAAGGGA GAAATTTGGG CAATTTTCAG AGGCTGGGAT ATCAGTTGGA GTGCTAGCTC AGAAAATCAT AAACATCCTT ATGAATATGA TTTTATTGGC CTTGGAGTGG TCTTTCTGGG AACAAGTGGA AGGGTTTGTT TCCCTCTTTC GCCAAGATGC ACAGGATGGA GTCCTCAACT TCAAATTCCA CCCAGCGAGA TGCTCAGGTT TTCGCATAAA GTCCCATCAT TCAAAATGAC TGGAAAGGAG AGAGAAGGTG TTCCTCCTGG GTGCTTTGAA TTAGATACTG CTGCTTTACC AAAAGAATTT TTCGAGGTTT GTGATTCTAA AGTTGATGTT GGGTTGGAGA GAGAAAGGCC GAATGGCAAA ACTGGTGGTC CTTTTCCTGA AGCTTCCAAG GTTGAAATGC AGGCAAATAC TACTCTAGAG AGCAGTCCAG TTAAAAAGAA ACGTCCAAAA GTCCATGACA ATCATGGTTC ATTCTCCAAA GAATCTGATG GTAGATGCAC TAATCATGAA AAGAACTCAG TGAAGAAGTC CAGAAAGAGT GTCAAAGCAG TAGATGTCTT GAATCTGCGA AAATCTCCTC GTCTTTTGAG TGAAACAAAC AGTCAAGCAA ATTCAAGGTC AGGCCAACAA ATAGCTGAGA AGAAGAGTGC TAACAATGGT GAATACTGTG GACAGCGAGG TGGGTTGTCT TTATCTGGTG AGAGGATGTC TACCCCAATG ATATCTGAGA AGACTATCAC AACGGATTCC TCAAGAATGA GAAAAACACC TCAGGATATA CACAAACCGA CAGGGAACCT AAAGAAACAT GGGAGAAATG ATGAGTCATT GTCTCAGTCC AGGGGTAATG GTTTGCTAAC TCAGTTGAAT GGTAGTATAA AATGCTCAGA ACCAGAGACT CGTGTTCCAT CCAGTTGCAA AACCGTGAAA GAAAACACTT TTAACTTCGA GAACCAGAGA TCTTGGGACA AGTTCCAGAT TGATCAAATA TGGGCCATTT ATAGCAATGA CGAAGGGATT CCCAGAAAGT ATGCTCAGAT CAAGAAAATC GACACAAGTC CTGAATTCAA GTTACATGTA GCACCTCTAG AGCTGTATCG CCCTCCAATA CACATGCCAC GCCCCGTGTG CTGTGGGCGC TTCAAGTTGA AAACCGGTAA AGCAGAAATA TTTGTACCTA GCAGCTTCTC ACATCAGGTT AAAGCCGTGA AGGCTAAGAG GAACAGATTC GAAGTATACC CGGGGAAGGG TGAGATCTGG GCTCTGTACA AGAACTGGAA TACCACAGAT TGTGCTGATA CTGAAGAACT TGAGATTGTA GAAGTAGTGG AAACCGACGA GCAAAGGATA CAAGCGATGC TTTTGACTGC TAAAGAGTTT AACAACAAGC CTCTCTACGG AAGTAGTCAA GAGTCAAATG CAAGTCTTGT AAACATTCCA AAGACTGAAG TGTGTAGATT CTCGCATCAG ATTCCTGCGT TTAGACATGA GAGAAGAGCG ACTCGGTTTG GAGATGGCGA ATACTGGGAG CTTGACCTGA AAGCAGTTAG GGGTCTCAAC TTAAAGAACC CATAG 
Length3315
Protein Sequence
Protein Residue
Map Locationscaffold_6: 12347022.. 12350366
Download Sequence
A.thaliana
AGI-codeAT5G27240.1
DescriptionDNAJ heat shock N-terminal domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.2915 Ahg472939 squamosa promoter binding protein-like 10
6 Ahg923423 Family of unknown function (DUF566)
8.94427 Ahg495205 Tetratricopeptide repeat (TPR)-like superfamily protein
9.16515 Ahg477548 Peptidyl-tRNA hydrolase II (PTH2) family protein
10.3923 Ahg478699 Cwf15 / Cwc15 cell cycle control family protein
13.3041 Ahg479273 tetraticopeptide domain-containing thioredoxin
15.2315 Ahg937129 metalloendopeptidases;zinc ion binding;DNA binding
21.4942 Ahg474203
33 Ahg895935 Protein of unknown function (DUF1138)
33.8231 Ahg942978 Transducin/WD40 repeat-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression