Detail



ID : Ahg927464

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927464|scaffold_203025.1
Sequence
TGTCTTGTCT TGTGTAAAGG ACAAGATGTC CCATAAGCGA AATCTTCCTT CTTGGATGAG TTCAAGGGAT CCTCAAACTA GTCCGGGTAA GTCTCATTGT AAGAAGCCTA AGGATGAAGA GCACAACAGC AGAAATGCCC CTTCCAACAA GTCAGAACAC GCTGAGCCAA GTTCAAGTAC CACGGAATTC TCTAAACTTA TGGAAGGAGT TGTTTTTGTG CTGTCGGGTT TTGTTAATCC TGAGAGGAGT ACACTGAGGT CACAGGCCTT GACAATGGGA GCCACCTATC AACCTGACTG GAACTCTGAC TCTACCTTGT TGATCTGTGC TTTTCCCAAC ACTCCAAAGT TCCGTCAAGT TGAAACAAAT GGGGGAACAA TAGTCTCAAA GGATTGGATA ACTGAGTGTT ATACGCAGAA GAAGTTGGTG GATATTGAGC AATACCTTAT GCATGCTGGA AAACCATGGA GGAAAAGCAA TGTTCGTCAA AATGCTATTC AAGAAAATAG CCAACACCTG TCTAAAAAAC CAGAGAAGCA AGTAGAGAAA AAAACAGAAA CAAGGGGAAC TCCATCTACC TCATCCAAGA ATAGATCAGC TTGCAATCTT GTGAAAGAGC CATTTTCTGT TACAGAGGTG AAGAAATGGG CCAGGGATGA CCTAACTCAA ACCATCTCAT GGCTTGAGAG TCAGGAGGAG AAGCCAGAAC CAGGCGAAAT CAAGCGAATA GCTGCTGAAG GAGTCTTAAC CTGCTTACAA GACGCCATAG AGTCTCTTGA ACAGAAGCAG GACATTGGAT CAGTTACAGA GCTATGGAGC TTTGTCCCTC GTGTAGTGAA GGAGCTTGGA AAGATCGAAT CGTCTTCTAA AAAAGAGAAT TCAACAGCTT CAAAGGAAGA ACTTTGCAAA CAAGCCAAGT CTTGGAAAAA GATCTATGAG GTTGAGCTAG CAAACACGAG TGAAGCTGAA TCATCGAGAA CAAAAAGCAG AGAGACCTCT CGGGTTGCCT GTGGCTATGA CAGTGATGAG ACCGTTGAGA TGACTGAAGA AGAGATCGAA CTTGCTTATA GGAATGTTTC TTTAGAGTGT CTTTAGATGA AACTTGTTTC ATTTTG 
Length1116
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17962653.. 17964510
Download Sequence
A.thaliana
AGI-codeAT1G80420.1
DescriptionBRCT domain-containing DNA repair protein
TAIR curator summary
Alias[ATXRCC1][XRCC1][homolog of X-ray repair cross complementing 1]
Gene coexpression
MR
MR Locus Description
8.12404 Ahg488185
27.5681 Ahg494005 Ribosomal protein S4
31.6228 Ahg938262 Leucine-rich repeat protein kinase family protein
33.8526 Ahg312135
37.4566 Ahg470372 Calcium-binding EF hand family protein
38.2361 Ahg487707 Protein of unknown function (DUF668)
46.1302 Ahg491257 D111/G-patch domain-containing protein
50.9902 Ahg939712 Protein kinase superfamily protein
51.4393 Ahg493279 Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3
59.7495 Ahg911261 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression