Detail



ID : Ahg928723

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928723|scaffold_301180.1
Sequence
CCGTTTTCTT TAACCGGGTC GGCGCTCATG GAGCTATGCA ATCAAAACAA CCACATCACC GGCGATCCGT TGAACTGGAA CGCGACGGCG GACGCTTTGA AAGGGAGCCA CTTGGACGAG GTGAAACGAA TGGTGGAAGA TTATAGGAAA GGGGCGGTGA AGTTAGGAGG TGAGACGTTG ACGATTGGTC AAGTCGCCGC CGTCGCTAGA GGAGGAGAAG GAGGAGTTAC GGTGGAGCTG GAGGAGGAGG CTCGTGCCGG AGTCAAGGCG AGTAGCGAAT GGGTGATGGA GAGCATGAAC CGAGGAACCG ACAGTTATGG AGTCACCACA GGGTTTGGTG CTACTTCCCA TAGAAGAACT AAACAAGGCG GTGCACTTCA AAATGAGCTT ATTAGGTTCT TGAACGCCGG AATATTTGGC ATCGGCGCCG GAGACACGAC ACACACGTTG CCAAAGCCGA CGACAAGAGC GGCAATGCTC GTCCGTGTCA ACACTCTCCT CCAAGGCTAC TCCGGTATAC GCTTCGAGAT TCTCGAAGCC ATTACAAAGC TTCTCAACCA CGAAATCACT CCGTGCCTCC CTCTTCGTGG CACCATCACG GCCTCCGGTG ACCTTATCCC TCTCTCTTAC ATCGCCGGAC TCCTCACCGG CCGTCCTAAC TCCAAAGCCG TGGGTCCCTT CGGTGAGACT CTCACTGCCT CTGAGGCCTT TAAGCTCGCG GGAGTATCGT CTTTTTTTGA GCTTCAGCCT AAGGAAGGAC TAGCACTTGT GAACGGGACA GCGGTTGGAT CGGGTTTGGC CTCGACGGTT CTGTTCGATG CAAATATTTT GGCTGTTTTG TCGGAGGTTA TGTCTGCCAT GTTCGCAGAG GTTATGCAAG GGAAACCGGA GTTTACCGAC CATCTTACGC ATAAACTCAA GCACCATCCC GGTCAGATCG AAGCAGCGGC GATTATGGAA CATATATTGG ACGGAAGCTC TTACGTTAAA GAAGCTCAAC TTATCCACGA AATGGATCCT CTTCAAAAAC CTAAACAAGA TCGGTACGCT TTACGTACAT CGCCGCAATG GCTTGGCCCG CAGATTGAAG TGATCAGATC GGCCACTAAA ATGATTGAGC GTGAGATCAA CTCGGTTAAC GATAACCCTT TGATAGATGT GTCAAGGAAT AAGGCTTTGC ACGGCGGGAA TTTCCAAGGG ACACCAATTG GTGTCGCCAT GGATAATTCT CGTCTAGCCA TTGCTTCGAT AGGGAAACTC ATGTTCGCCC AGTTTTCTGA ACTAGTGAAC GATTTCTACA ACAATGGTTT GCCTTCTAAT CTATCCGGTG GGAGAAACCC TAGTCTTGAT TACGGATTTA AAGGCGCGGA GATAGCCATG GCTTCTTATT GCTCCGAGCT TCAGTTCTTG GCTAATCCGG TGACCAACCA TGTCCAAAGC GCAGAGCAGC ATAACCAAGA TGTTAATTCC CTAGGGTTGA TCTCAAGCCG GAAAACCGCA GAAGCAGTCG ATATCCTCAA GCTAATGTCC ACGACCTATT TAGTCGCGCT GTGCCAAGCC ATTGATCTAA GACATCTTGA AGAGAATCTG AAGAAAGCAA TTAAATCTGC AGTGAGTCAG GTGGCGAAAC GGGTCTTAAC CGTTGGGGTC AATGGTGAGC TACATCCTTC GAGGTTCACT GAACGCGATG TTCTCCAAGT GGTTGACCGA GAATACGTGT TCTCATACGC AGACGATCCC TGCAGCCTCA CTTACCCGTT AATGCAGAAA CTTAGACACA TTCTTGTAGA TCACGCTTTA GCGGATCCAG AACGCGAGGC CAATTCCGCT ACATCAGTTT TCCAGAAAAT CGGAGCTTTT GAGTCCGAGC TGAAACTGCT TCTCCCTAAA GAAGTGGAAC GTGTCCGGGT TGAGTACGAG GAAGGATCCT CGACTATAGC TAACCGGATT AAGGAATGTC GGTCTTATCC GCTGTACCGG TTTGTCCGCA ACGAGCTAGA TACTGAACTG CTCACTGGAG AGAATGTTCG GTCGCCGGGA GAGGAGTTTG ATAAAGTGTT CTCGGCGATT TCTGATGGAA AGCTTATTGA TCCGTTGTTG GAATGTCTCA AGGAGTGGAA CGGAGCTCCG ATTCCGATCT GTTAAAAATC TTTTTTTATA GATCTC 
Length2166
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3872803.. 3875858
Download Sequence
A.thaliana
AGI-codeAT3G10340.1
Descriptionphenylalanine ammonia-lyase 4
TAIR curator summaryEncodes PAL4, a putative a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).
Alias[PAL4][phenylalanine ammonia-lyase 4]
Gene coexpression
MR
MR Locus Description
4.89898 Ahg928947 serine carboxypeptidase-like 15
9.16515 Ahg905145 4-coumarate:CoA ligase 2
10.583 Ahg472152 Nucleotide-diphospho-sugar transferases superfamily protein
11.7473 Ahg482815 Laccase/Diphenol oxidase family protein
13.6015 Ahg938226 phenylalanine ammonia-lyase 2
14.4914 Ahg485206 GDSL-like Lipase/Acylhydrolase superfamily protein
15.8745 Ahg487528 HXXXD-type acyl-transferase family protein
16.3707 Ahg489261 SLAC1 homologue 3
17.9444 Ahg491090 Transducin/WD40 repeat-like superfamily protein
20.3961 Ahg321803 F-box family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression