Detail


ID : Ahg929351

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929351|scaffold_301808.1
Sequence
GCTGGCTTCA TTGCTACGAC CATGAGCTAC CACAACGAGG AAGAAGAGGA AGGAGACACC AACGATTGCT TCTACGAGTC TCTTGATCGT TTAGCTTCTT CCTCTTCTTG CTCTTGTTCC GCTTCTAACT CTGATTACGA TTCCGAATCC TCTCCTCGGA TCTCCTCCGC CGCTTCTCAT GACCCTGAAG AACACAACGG TGGGGGTCGC CGCCGCCGAT ATCCATTCCC AGTTCCTCGG TTTCCAATGG GAGCCTCAAA GTTCGACGTT TGGATCTCTG AACCTGCTTC TGTCTCCGAG AGACGTTCCA AGCTTTTAAA CGAAATGGGT CTTAGCCGTG ACCCGGTTCT CTCCCGGTTA AAACCCGTTT CGGATTCCAG CTCCAAAGAA ACCGGAGAAG GCAGCTCCGA CATTTCCCGA TCGATCTCGT GTAATCAATT GGCTCGGCGA GATCATGGAG AGTGTTTTGA AACTGTCGGC GGTTGTGCTT CTTGCATCGT GAGATCGAAA TCCGACATTA CCACTAGCCA ATGTGGTGAT CGTGAACGTC GATATACGTC TCTTGGTAAT TCTTGTTCTT GTTCAGTCTC TAAACTCTCT GTTCGTCATC CTTCACATTC AGAGATCAGT AGAACCAGCC CACCATTTGT CAATTGCAGT TTGGGATCAG TTAGTGCTGA TTCGTGTGAG AATTCATTGC GGTTAAATGG AGATACTGAC TGTGTACTGA GCGAGAGTGT AGTGAATGAG GAAGTGGAAG TGTGTACTAT TAAGAATCTT GATAATGGGA AAGAGTTTGT GGTGAATGAG ATTCAAGAAG ACGGTACATG GAAGAAGGTG AAGGAAGTGG GAACTGGAAC GCAGATGACG ATGGAGGAGT TTGAGATGTG TGTTGGACAT TCTCCCATTG TTCAGGAGCT TATGAGAAGA CAGAACGTTG AGGATTCTGA TAAGAACACG TCTAAGGAAA ACGAAGACAG TGGGAATAGT AATAAGGATA ATGCATCGAA GTCTAAGAAG AAAGGAAGTT GGTTTAAGAG TATTAAGAGT GTTGCAAGTA GCATGACTGG TCATAGCAAA GAGAGACGAA GCAGCGATGA TAGAGATACA TCGTCAGAGA GAGGTGGTCG GAGGTCGAGC TCTGCTACTG ATGATTCTCA GGAATCTTCT TTTCACGGGC CGGAAAGAGT TAGGGTTAGA CAGTATGGGA AATCATCTAA AGAGCTCACG GCATTGTACA AGACGCAGGA GATTCAAGCG CATAATGGTT CTATTTGGAG CATTAAGTTT AGTTTGGATG GTAAATATCT TGCTAGTGCT GGTGAGGATT GCATCGTTCA TATCTGGCAA GTCGTCGAGG CTGAGAAGAA GGGAGAGTTG CTACTTGATA GACCGGAACT GTTGCTTTTG GCTAATAATG GGTCTCCAGA ACCAACTACT ATGTCACCAA GGAGAAGAGG GAGAACTTCT ATAAGTAGAA AGTCATTGAG TTTAGAGAAC ATATTTGTTC CAGATTCTCT TTTCGGGCTT TCGGAAAAGC CCTTTTGTTC CTTTCAGGGA CATGTGGATG ATGTACTTGA CCTTGCTTGG TCCAAGTCTC AGTATTTGCT TTCTTCATCA ATGGATAAAA CAGTTCGTTT GTGGAACTTG TCCAGCCAGA CTTGCTTGAA AGTATTTTCG CACAGTGATT ACGTGACTAG CATCCAATTT AATCCGGTCG ATGATAGATA CTTTATCAGC GGATCCTTAG ATGCAAAAGT TCGCGTCTGG AGCATTCCAG ATCGTCAAGT AGTTGACTGG TATGATCTTC ATGAGATGGT CACTTCTGCT TGCTACACTC CAGATGGTCA GGGTGCGTTG GTTGGTTCAT ACAAAGGTAG CTGTCGCATG TATAGTGCAT CAGATAACAA GCTGCAACAG AAAAGCCTGA TAAATTTACA GAACAAGAAG AAGAAAGCTC ATCAAAAAAA GATAACTGGT TTCCAGTTTG TGCCTGGGAG CTCATCTGAA GTGCTTGTCA CATCTTCCGA TTCAAGGATC CGTGTTGTTG ATGGAACTGA TCTAGTTAAC AAACTTAAAG GGTTTCGGAA TACGAGCAGC CAGATATCTG CCTCAATCAC AGCAGATGGG AAATACGTAG TTTCAGCGAG CGAGGATTCG CATGTGTACA TATGGAAATA CGAATCCCCT GCTTCTCGAC CAAGCAGAAG TAACAACAAC AAGAACGTGA CGGTCACAAA CTCTTACGAG CATTTCCATA GCCAAGACGT CTCTGCAGCC ATCTCATGGC CCGGAATGGC TTCAACAGAA AACTGGGGAA CTCAAAACAG AGCCGGGTTT AACGGAAACA CCAATAATTT GGACAATGTC TCCACAGCTA ACCATCCGCC TACACCCGTA GACCAGCCAG GGGCAGTGGA CCGATTAAAC AGTCCAAGGA ACGGGATCAT ATCGAGCGCA ACAAACGGAT ACTTTTTCGA TAGAATATCA GCGACTTGGC CTGAAGAGAA ACTGTTGTTT GGAAGGAACA GAAGTGGGAA TCGTCTGAGT ACTGATATGT CGTCGTCAAA TGGAAACTCA GGGAATGTAT CAGCTTCTTG GGGAATGGTG ATAGTCACTG CAGGTCTGAG AGGAGAGATA CGAACGTTTC AGAACTTTGG TTTGCCCATT CGGATTTGAT AAAAAGTGTA CAGAGTGAA
Length2699
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6134518.. 6137815
Download Sequence
A.thaliana
AGI-codeAT3G15470.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.24264 Ahg930784 RNA polymerase Rpb6
7.74597 Ahg908702 FORMS APLOID AND BINUCLEATE CELLS 1C
14.2829 Ahg477717 AT hook motif DNA-binding family protein
15.1658 Ahg909961
17.3205 Ahg477863 Drought-responsive family protein
18.1659 Ahg927599 Galactose mutarotase-like superfamily protein
21.2132 Ahg889354 Protein with RING/U-box and TRAF-like domains
21.587 Ahg475559 plastid-encoded CLP P
22.4499 Ahg493763 pfkB-like carbohydrate kinase family protein
25.2587 Ahg485400 Phosphoglycerate mutase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression