Detail



ID : Ahg929397

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929397|scaffold_301854.1
Sequence
CTTCTCATCA GAACGGTTCC CATGGCTGCT GCCGCTAATA CCGCCGCCAT TTTCGCCTCT CCTTCGCAGC CTTTATCCTC TAAACGGAGT TTTTTGTATA GTTCAACGAT TGGTCCAATA CTTAGGAGAT TTCCAAGGAA GAAACTTGTT CTCCAAGTTA AAGCTGTTGC CACGACTCTT GCACCTCTCG AAGAGATCAA AGAATATAAG CTTCCTTCAT GGGCCATGTT CGAGATGGGT ACTGCTCCTG TGTACTGGAA AACCATGAAT GGTCTTCCTC CAACTGCAGG TGAGAAGTTG AAACTTTTCT ATAATCCAGC TGCAAGCAAA CTCACACTTA ACGAGGACTA TGGGGTTGCA TTCAACGGAG GATTTAACCA ACCAATCATG TGTGGTGGGG AGCCAAGAGC AATGCTTAAG AAGGATCGAG GCAAAGCCGA TTCTCCAATT TACACCATGC AGATTTGCAT TCCAAAGCAT GCTGTGAATT TGATATTCTC GTTCACCAAC GGTATTGACT GGGATGGTCC ATACAGACTT CAGTTTCAAG TCCCCAAGCG ATGGCAAAAC AAACCTATTG AGTTCTTCAA TGAGGGTCTA GCGAATGAGT TGAGCCAAGA TGGAGCCTGC GAAAGAGCAA TATTTCCTGA CTCGAACGTT GTTGCAACTC GTTGCACAAT GATCGCCAAC TTGACGGTCG AAGGAGGAGA TAGATGCAAT TTGGATCTAG TTCCTGGGTG CATGGATACA AATTCAGAAC ATTTCAACCC ATATGCTAAT GTTGATGATG GCTCTTGTCC ACTCGATTTA TCCGATTCTG ATGAATAGAG CTAGATTTTA TTTATGTAAA TATATAAACA CATGTGTTAA TATCAGTGTT 
Length880
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6300656.. 6302228
Download Sequence
A.thaliana
AGI-codeAT3G15840.1
Descriptionpost-illumination chlorophyll fluorescence increase
TAIR curator summaryEncodes a chloroplast-targeted protein localized in the stroma that is a novel component essential for NDH-mediated non-photochemical reduction of the plastoquinone pool in chlororespiratory electron transport.
Alias[PIFI][post-illumination chlorophyll fluorescence increase]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg910333 alpha-crystallin domain 32.1
3.16228 Ahg492004 thylakoid-associated phosphatase 38
4 Ahg483917 CP12 domain-containing protein 1
4.89898 Ahg936324 cytochrome P450, family 71, subfamily B, polypeptide 4
5.2915 Ahg950808 4-hydroxy-3-methylbut-2-enyl diphosphate synthase
5.38516 Ahg475823 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein
5.47723 Ahg472406 DPP6 N-terminal domain-like protein
7.2111 Ahg929660
8.3666 Ahg484369 Plastid-lipid associated protein PAP / fibrillin family protein
9.64365 Ahg495796 Lactoylglutathione lyase / glyoxalase I family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression