Detail



ID : Ahg929441

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929441|scaffold_301898.1
Sequence
AAAAAAGATC AGAGCAAGAC TATGGGAAGT GTACAGTTGA ATGGTTCAGG CTTAGTAGCT TCTCTACCTC CAAATCATAG CTTTAGCCAC AAAACCAAAC TTAGTAATCC AAAGTCATAC TTCTTGCGCT CAAAACACAA TGCCGCCGGA ACCAAAACCG TCCGAGCCAT AAGCACCGCA CCAGCGAGCC AGCCTCCAGC CGCAGATGAG TCTGACGAAC CTCCTGCTGT CGATTTTGCG TTCATCCATT CGGTGTTGTT GCCGGACGGG ACACCGGACG TGCATTGGAG AAGAGCGTGT GGTGGACAGA AACTAAGAGA CATAATGTTG GATTCTAACA TCGAACTCTA TGGTCCTTAT AGTAAGCCTT TGTCAAACTG CGCAGGAGTA GGAACTTGCG CTACTTGCAT GGTCGAGATT GTTAATGGAA AGGAGCTTTT AAATCCACGA ACAGAGATTG AGAAGGAGAA ACTCAAAAGG AAACCAAAAA ATTGGAGACT AGCTTGTCAA ACCAACGTGG GAAATCCAGA TTCTACCGGA TTGGTTGTCA TACAACAATT GCCAGAGTGG AAAGCTCATG AATGGAACAT CCCTAAGAAT ATACCTAATG ACGATGATCT CGAAACTTCT ACGTGAAACC ATCCATTGTC ATTATT 
Length656
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6461415.. 6462618
Download Sequence
A.thaliana
AGI-codeAT3G16250.1
DescriptionNDH-dependent cyclic electron flow 1
TAIR curator summaryencodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP. Contains a 4Fe-4S cluster.
Alias[NDF4][PnsB3][NDH-dependent cyclic electron flow 1][Photosynthetic NDH subcomplex B 3]
Gene coexpression
MR
MR Locus Description
8.7178 Ahg494136 Ribulose bisphosphate carboxylase (small chain) family protein
14.8997 Ahg494137 Ribulose bisphosphate carboxylase (small chain) family protein
15.8745 Ahg473938 mitochondrial lipoamide dehydrogenase 1
18.5742 Ahg316308 Protein of unknown function (DUF1295)
18.8944 Ahg496566 RING/FYVE/PHD zinc finger superfamily protein
19.1311 Ahg472262 Cupredoxin superfamily protein
20.3961 Ahg493621 glutamine synthetase 2
21.4009 Ahg484472 shikimate kinase like 1
23.6643 Ahg474725 Rubredoxin-like superfamily protein
23.8747 Ahg493636 glucose-6-phosphate dehydrogenase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression