Detail


ID : Ahg494137

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494137|fgenesh2_kg.7__3570__AT5G38410.1
Sequence
GGTTCTCACT ATATAAAGAT GACCAAACCA ATAGACAAAC AAGTAAGTAA GTGAAAAGAG CAAAAGAAGA AGAGAAACAA CAAGAAGAAG TAATGGCTTC CTCTATGCTC TCCTCGGCCG CTGTGGTTAC CTCCCCGGCT CAAGCCACCA TGGTCGCTCC ATTCACCGGC TTGAAGTCAT CCGCTGCTTT CCCGGTCACC CGCAAGGCCA ACAACGACAT TACTTCCATC GCAAGCAACG GGGGAAGAGT TAGCTGCATG AAGGTGTGGC CACCAATCGG AAAGAAGAAG TTTGAGACTT TATCTTACCT CCCTGACCTT ACTGACGTCG AATTGGCTAA GGAAGTTGAC TACCTTCTCC GCAACAAGTG GATTCCTTGT GTTGAATTCG AGTTAGAGCA CGGATTTGTG TACCGTGAAC ACGGAAACAC TCCCGGATAC TACGATGGAC GGTACTGGAC AATGTGGAAG CTTCCATTGT TCGGATGCAC CGACTCCGCT CAAGTGTTGA AGGAAGTGCA AGAATGCAAG AAGGAGTACC CTAATGCCTT CATTAGGATC ATCGGATTCG ACAACAACCG TCAAGTCCAA TGCATCAGTT TCATCGCCTA CAAGCCCCCA AGCTTCACCG ATGCTTAATT CCCTTTCTAA AACATTCATA TAAATTATCT CTACTCATTT CATTCCTATT GTCTGTGTTG TTTTCTCTTT ATGAGACATT TTATATCGGA TTGTCAAATG TCTGATTTAT GAATATGTAT TTTATATATT CTTGCGTCTT GATTTTT
Length787
Protein Sequence
Protein Residue
Map Locationscaffold_7: 22511223.. 22515563
Download Sequence
A.thaliana
AGI-codeAT5G38410.3
DescriptionRibulose bisphosphate carboxylase (small chain) family protein
TAIR curator summary
Alias[RBCS3B][Rubisco small subunit 3B]
Gene coexpression
MR
MR Locus Description
1 Ahg472262 Cupredoxin superfamily protein
1.41421 Ahg494136 Ribulose bisphosphate carboxylase (small chain) family protein
2.82843 Ahg493621 glutamine synthetase 2
3.4641 Ahg943235 ATPase, F1 complex, gamma subunit protein
5 Ahg492755 photosystem II subunit QA
5.65685 Ahg480223 photosystem II subunit X
5.91608 Ahg485048 plastid transcriptionally active 16
6.9282 Ahg470689 photosystem II subunit P-1
8.3666 Ahg937931 photosystem II subunit O-2
9.43398 Ahg347932 DNAse I-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression