Detail



ID : Ahg494136

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494136|fgenesh2_kg.7__3569__AT5G38430.1
Sequence
AAGAACAAGA CGTAGTGATG GCTTCCTCTA TGCTCTCCTC TGCCGCTGTG GTTACCTCCC CAGCTCAAGC CACCATGGTC GCTCCATTCA CCGGCTTGAA GTCATCCGCT GCTTTCCCCG TCACCCGCAA GGCTAACAAC GACATTACTT CTATCTCAAG CAATGGCGGA AGAGTTAGCT GCATGAAGGT GTGGCCACCA ATTGGAAAGA AGAAGTTTGA GACTCTATCT TACCTCCCTG ACCTTACTGA CGTCGAATTG GCTAAGGAAG TTGACTACCT TCTCCGCAAC AAGTGGATTC CTTGTGTTGA ATTCGAGTTA GAGCATGGAT TTGTGTACCG TGAGCACGGA AACACTCCCG GATACTACGA TGGACGGTAC TGGACAATGT GGAAGCTTCC ATTGTTCGGA TGCACCGATT CTGCTCAAGT GTTGAAGGAA GTGCAAGAAT GCAAGAAGGA GTACCCTAAT GCCTTCATTA GGATCATCGG ATTCGACAAC AACCGTCAAG TCCAATGCAT CAGTTTCATT GCCTACAAGC CCCCAAGCTT CACCGATGCT TAATTCCCTT TCTTGAATGT TCAGCGTTGA CTAGTA 
Length596
Protein Sequence
Protein Residue
Map Locationscaffold_7: 22511280.. 22515431
Download Sequence
A.thaliana
AGI-codeAT5G38430.1
DescriptionRibulose bisphosphate carboxylase (small chain) family protein
TAIR curator summary
Alias[RBCS1B][Rubisco small subunit 1B]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg494137 Ribulose bisphosphate carboxylase (small chain) family protein
3 Ahg493621 glutamine synthetase 2
3.4641 Ahg472262 Cupredoxin superfamily protein
8.7178 Ahg929441 NDH-dependent cyclic electron flow 1
9.79796 Ahg485048 plastid transcriptionally active 16
11.0905 Ahg476161 beta carbonic anhydrase 4
12.49 Ahg470899 photosystem I subunit O
12.6491 Ahg347932 DNAse I-like superfamily protein
12.9228 Ahg938433 glutathione transferase lambda 2
13.4164 Ahg477371 carbonic anhydrase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression