Detail



ID : Ahg940511

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940511|scaffold_601055.1
Sequence
GGCTGCTCCT TCTCCGGCTG ATGTTCCCGC TGCATCTCCA CCAGCACCAG AAGGTCCCAC CGCTAGCCCA AGCGGTGCTC CAGGACCTTC AGATGCCGCC GCTGCCCCAA GCGCCGCTTT CTCCAACAAG GCTTTCTTCG CCGGAACCGC ATTCGCCGCT ATTATGTGAT TGCAATTTCA GATGGGGTGA AAAAAAAAAA AAAAAATCAG CTGGGGTGTC ACTTGCGGTT CATATTCTCG TGTGTTGGTT CTTCGTGTAT GGTTATAAAC TCGGAATCAT AGGGACCATA GCTAGTGTGA ACGTGCCATG GTGGTTGAAC ATCTTCATCT TGTTTATGTA CAGCACACGT GGTGGTTGTA CACTCACTTG GACCGGCTTC TCCACCGAAG CTTTCACCGG ACTTTTAGAA TTCACAAAAC TCTCTGCCTC TTCCGGAATC ATGCTTTGTT TAGAGAATTG GTACTATAAA ATACTAATCT TGATGACCGG AAACCTAGTA AATGCGAAAG TTGCGGTGGA CTCCTTATCT ATATGCATGT CCGTAAATGG TTGGGAGATG ATGATCCCAC TTGCTTTATT TGCGGGAACC GGGTACAAAA TTCGTATTCG TTTGCTAATA AGTTTACAGT TACGTATGAA TGGGATGCTA TATATTTATT TAATATCTCC ATCAAAGATA ATAAGATGGC CCAAAGGCTG CAAACTGTTT CACCAAAATT ATTTTTGACA TCCATTAACC TGTTTCCT 
Length748
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3989712.. 3993305
Download Sequence
A.thaliana
AGI-codeAT5G10420.1
DescriptionMATE efflux family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.7473 Ahg900248
12.4097 Ahg933489 TRICHOME BIREFRINGENCE-LIKE 45
12.49 Ahg484442 Protein kinase superfamily protein
15.2971 Ahg935057
18.303 Ahg944134 Leucine-rich repeat protein kinase family protein
18.3848 Ahg483603 cyclin p4;1
20.0998 Ahg471290 xyloglucan endotransglucosylase/hydrolase 8
20.8327 Ahg482096 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
21.4243 Ahg470382 HAD superfamily, subfamily IIIB acid phosphatase
23.9165 Ahg474543
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression