Detail



ID : Ahg934079

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934079|scaffold_402067.1
Sequence
CTCATTTACA TCAAAAGAAA ATGGCGTTTG CGATATCAAA GCGAAACGCA ACCGCGTTTC TTCTAACGCT ACTACTAGTC TCCGTTCCAT TGTCTTTCTC TACGCTACAA CAAGATTTCG TGAAGTGCCT TGTCGACAAC TCAGACGTCT CGTTCCCTAT AACGGCGTCG TTTTTCTCAC CGGACCAAAA CGCTACTTTG TTTAAAGAAG AGCTTGAATC AACGGCACAG AATCTCCGTT ACTTGACGCC GTCATACCCG AAGCCTGTAT TCATATTCGA GCCTTTGTAC GAGACGCATG TCCAAGCAGC GGTCGTGTGT GCCAAGAAGC TTCAGCTTCA CCTCCGGCTA CGTAGCGGTG GTCACGACTA CGAAGGGCTC TCGTTCGTCG CCGAGGACGA GACGCCGTTT GTGATCGTTG ATTTGTCAAA GCTTAGACAG GTCGACGTTG ATTTGGACAG TAACAGTGCG TGGGCTCATG CTGGTGCTAC CATCGGAGAG GTTTATTACA GGATCCAAGA GAAAAGCCAA ACCCATGGTT TCCCGGCTGG TTTATGCTCG AGCCTTGGCA TCGGCGGCCA CTTAGTCGGC GGAGCGTACG GTTCCATGAT GCGTAAGTTC GGTCTCGGCG CTGACAATGT CCTCGACGCC AGAATTGTCG ACGCCAACGG CCAGATCCTT GATCGCGCGG CGATGGGAGA AGACGTTTTC TGGGCGATTC GCGGTGGTGG CGGTGGTAGC TTCGGCGTGA TACTCGCCTG GAAGATCAAG CTCGTCCCCG TTCCGGCGAC CGTTACGGTA TTCACAGTCA CGAAGACGCT TGAGCAAGAC GGAACTAAAG TTTTATACAA ATGGCAACAA GTCGCTGATA AGCTTGACGA TGATCTCTTC ATTCGCGTCA TTATTTCGCC GGCGAGTAAA ACTACCAAAC CGGGAAATCG AACCATCTCT ATGTCGTACC AAGCTCAGTT TCTCGGCGAC TCGAATCGGC TCTTGCAGGT GATGCAGAAG AGTTTCCCTG AGCTAGGACT GACGAAGAAG GACTGCACAG AGATGAGCTG GATCAAAGCA GTGATGTACA TTGCAGGATT TCCAAACAGT GCACCACCAG AAGCTTTACT AGCTGGAAAA TCATTGTTCA AGAATCACTT CAAGGCCAAG TCAGACTTTG TGAAAGAGCC AATTCCAGTA GAAGGTTTAG AAGGATTATG GGAAAGGTTT CTAGAAGAAG ATTCGCCGCT AACGATATGG AACCCTTACG GAGGAATGAT GTCGAGGATC TCCGAGTCAG AGATACCTTT CCCTCATAGA AACGGGACGT TGTTCAAGAT TCAGTGGCTA AGCACGTGGC AAGATGGGAA AGTGAGTGAG ACAAGGCATA TGAAGTGGAT TAGGGAAATG TATAGTTACA TGGAGCAATA CGTGTCGAAG AACCCGAGAC AGGCCTATGT GAATTACAGG GATCTTGATT TGGGGACGAA TGAAGGAGAG AGTGATGCTA GAGAGTGGGG TGCTAAGTAT TACAAAGGGA ATTTCGAGAG GTTGGTGAAG ATTAAGGGTG AGTTTGATCC TGACAATTTC TTCAGGCATG AACAAAGTGT TCCCACAAAG ATTGGTTGAT GGATTGGAGT GAGTTGGTTA 
Length1640
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15663060.. 15665882
Download Sequence
A.thaliana
AGI-codeAT2G34790.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias[EDA28][MEE23][EMBRYO SAC DEVELOPMENT ARREST 28][MATERNAL EFFECT EMBRYO ARREST 23]
Gene coexpression
MR
MR Locus Description
8.3666 Ahg321182 Protein kinase superfamily protein
19.2094 Ahg485364 myb domain protein 77
21.3542 Ahg929526 COBRA-like protein 8 precursor
26.3818 Ahg928723 phenylalanine ammonia-lyase 4
28.8964 Ahg471972 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
31.0805 Ahg927453 Sterile alpha motif (SAM) domain-containing protein
36.9459 Ahg939759 heat shock transcription factor A3
39.598 Ahg937476 Plant invertase/pectin methylesterase inhibitor superfamily
40.4969 Ahg929759 tetratricopeptide repeat (TPR)-containing protein
50.6754 Ahg487140 GDSL-like Lipase/Acylhydrolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression