Detail



ID : Ahg934080

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934080|scaffold_402068.1
Sequence
ACACAAATAA CAAAATGAAA ATGAAGTTCT GGTCACGACC AACGTTTCTT ATAATTATTA TCTATCTCAT AACAATTAAA CGAGTCAACT CATCACCACC GTCATTATCT GTACCGGAGC ATTTTCTCCG ATGTCTCGAT ACTCAGCCGT CCGACCACGG CAGTCCCAAC TCCATAACCG CCGTGATCCC CACAAACTCA TCTTTCTCAA CAAATCTAAT GAATGGCGTC AGAAACCTCC GGTTCGCTTC TGCCTCCACA AGAAAACCAG AAGCCATCGT CGCCGCGGTC ACCGAAACCC ACATAAGAGC AACAATCTCC TGCTGCAAAC TCTTAAACCT CGAGCTAAGA ATCCGTAGCG GTGGCCACGA CTACGAAGGC TTCTCCTACA CTTCTCCGGT ACCATTCGTA ATCTTAGACA TGTACAACTT CAACAAAATC GATATCAACA TGAAAGACGA AACCGTTTGG ATCCAATCCG GAGCCTCACT AGGTCAGCTT TACTACAACA TTGCAAGCAA AAGCAAAGTC CACGCTTTTC CCGCCGGAGT TTGTCCTAAA GTCGGCGCCG GAGGACATTT TAGCGGCGGA GGATTCGGTA ACCTCATGAG AAAATACGGT TTATCGATTG ATCATATAAT CGACGCTCAA ATCATGGATG CCAACGGTAA AGTCTACCGT AACCGTCAAG CTATGGGAGA AGACGTGTTT TGGGCTATTC GCGGCGGAGG CGGCGGAAGC TACGGCGTCA TTCTTGCCTG GAAGATTAAG CTCGTTAGGG TTCCGGAGAA AGTCACAGTT TTTAAACTAG AAAGAACGGT GAGAGAAGGT GCCGTTGATT TAGTCCATAA ATGGCAAGAA GTAGCTCCGG TTATCGATAG AGATTTGTTT ATCCGGTTAG AGATTAAACC GATAAACCGG AGAATCTCTA AAGGTAAGAC GATCAAAGTC TCCTTCATAG GAATGTTTCT TGGTTTACCA GAGAAACTTC TTAACATAAC AAAACAGAGT TTCCCGGAGC TACATTTAAC GAAATCAGAT TGTGTGGTCA AGAAATGGAT CGATTCTACG GTTTTCTGGG CGAATTACCC AGAAAAAGCA CCGATAGAGA TACTTAACAA AAGAGTATCA ACCAATGAAT ACTACTGGAA ACGTACTTCA GATTTTGTTC AAACACCAAT CTCAAAACAG GGTCTTGCAA AGATTTTTCA AACAATGATT GATCATTCGC CACTTCCACG ACGAGTTTGG ATGCAATGGA ATGCATGGGG AGGGAAAATG GGGGAGATTG CGTCTGATGC GACGCCGTTT GTGCATAGAG GTGGTAACAT TTTCATGATT GAGCATTTCA TGAATTGGTA TAGACCTGGA GATGAGCTTG AAGAGAAGTT CTTGGCGATT GCAAGAAGTT TTAAAGAAGC TATGGCTCCG TTCGTTTCCA AGAATCCGAG AGAAGCTTTC TTTAATTACC GAGACGTTGA TATCGGAATT ACGACGCCGG GATATAACGC GACGTATGAA GGAGCTAAGG TTTATGGGGA CAGTTATTTC AAAGGGAATT ATTTGAGGTT GGTTAAGATT AAAGCCCGGT TCGACCGGAC TAATTTTTTC CGGTCTCAGC AAGGGATTCC GGTTCTTGCT TAGTTTGGTG ATTGGTGAGT GTT 
Length1663
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15671451.. 15673112
Download Sequence
A.thaliana
AGI-codeAT2G34810.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg938669 Calcium-dependent phosphotriesterase superfamily protein
2.44949 Ahg484876 arogenate dehydratase 4
4.3589 Ahg938670 Calcium-dependent phosphotriesterase superfamily protein
8.12404 Ahg930378 Cyclopropane-fatty-acyl-phospholipid synthase
8.3666 Ahg952462 glutathione peroxidase 2
8.66025 Ahg492090 tryptophan synthase beta-subunit 2
9.59166 Ahg482690 PHE ammonia lyase 1
9.94987 Ahg491183 arginine decarboxylase 2
10.247 Ahg493199 acyl-CoA oxidase 1
12 Ahg919631 copper/zinc superoxide dismutase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression