Detail



ID : Ahg492090

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492090|fgenesh2_kg.7__1523__AT4G27070.1
Sequence
GCCATATTCT CACCAACCTT TTTTTGTTGT TCGCAAATAA GTTAACGTGG TACTGATTTC CTCCTCTATT TTTTTTTATT GAATTTCTGG TCAAAAAAAG GTAAGTGTCA CATAACGAAT CTATAAAACA AAACCACACT TTCAAGGTTT TTGTCAGCAA AACATTTGTC TTTGAGTTTG AGAGATAGAT AAAGATTCAC TAATGGCCAC CGCAGGCACC GCTGCTACTT TCAGACCCTC CGTTTCAGCT TCTTCCGAAG CAACCCGTCT GAGATCGCCC TCCAAACTCC CCAAATTTAC GCCTCTGCCA TCGTCTCGCT CACGGTCCTC TTCTTCGTTT TCCGTCTCTT GTACCATCGC TAAGGACCCG ACTGTTTTCA TGGCGGATAC GGAGGCCGCT GGATCTGATC CGACCATGTG GCAACGGCCT GATTCATTCG GTCGGTTCGG GAAGTTTGGC GGGAAGTATG TCCCCGAAAC TCTAATGCAC GCCCTCTCTG AACTCGAAAC GGCTTTCTAT TCGCTCGCCA CCGACGAAGA TTTCCAGAGA GAATTGGCAG AGATCTTGAA AGACTATGTG GGTCGGGAAA GTCCTCTTTA CTTTGCAGAG AGGCTCACAG AGCATTACCG CCGAGAAAAC GGGGAAGGAC CCCTCATATA CCTCAAAAGG GAAGACTTGA ACCACACCGG TGCTCACAAG ATCAACAACG CTGTGGCTCA GGCTCTTCTC GCCAAGCGTC TAGGAAAGAA ACGGATTATT GCTGAGACAG GGGCTGGTCA ACATGGTGTA GCCACAGCTA CCGTGTGTGC ACGTTTCGGT TTGCAGTGCA TTATCTACAT GGGTGCTCAA GACATGGAGA GACAAGCTCT TAATGTGTTC AGAATGCGTC TTCTCGGTGC TGAGGTAAGG GGAGTCCACT CTGGAACAGC CACTTTAAAG GACGCAACTT CTGAAGCTAT AAGGGATTGG GTGACAAATG TGGAGACTAC ACATTACATA TTGGGATCCG TTGCGGGTCC TCATCCTTAC CCTATGATGG TCAGGGACTT TCATGCCGTG ATTGGTAAAG AAACAAGGAG ACAAGCTATG GAGAAATGGG GCGGGAAGCC TGATGTTCTG GTTGCTTGTG TCGGTGGTGG TTCAAATGCC ATGGGACTCT TCCATGAATT TGTCGATGAC ACAGAGGTTC GGATGATTGG TGTGGAAGCC GCTGGATTTG GATTGGACAG CGGCAAACAC GCTGCCACAT TGACAAAAGG AGATGTCGGT GTACTCCATG GAGCTATGAG TTACTTGCTG CAAGATGATG ATGGCCAAAT CATTGAACCA CACTCCATCA GTGCCGGATT GGATTACCCT GGAGTCGGAC CTGAGCATAG TTTCCTTAAA GACATGGGAC GGGCTGAGTA CTATAGCGTT ACCGATGAAG AAGCCTTAGA AGCTTTCAAG AGAGTGTCTC GGTTGGAGGG AATAATCCCG GCACTGGAGA CATCGCACGC GTTGGCCCAT CTAGAGAAGC TTTGTCCGAC GTTACCTGAT GGAACCAGAG TGGTCTTAAA CTTCAGTGGG AGAGGCGACA AGGATGTTCA GACTGCAATC AAATATCTCG AAGTTTAAAG AGTAGATTAC TTTCATTTTC ACATAGTGAT ATTTCTTCTA CATGTAGTTT GTTAGTTCTT GCTTATGGTC GAGAATCCAA AAGTTTGGAT CAGAGGGTTA AAAGAAGAGA ATAAATGTTA TGAATGTATC CTATAAATAA TAAGAATGTT CTATGGAACG TATGATGTTC TTATAAGCAA TTCGAACTGT TTTGTTCTTG AC 
Length1822
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5936831.. 5939154
Download Sequence
A.thaliana
AGI-codeAT4G27070.1
Descriptiontryptophan synthase beta-subunit 2
TAIR curator summaryTryptophan synthase beta. Expressed at low levels in all tissues.
Alias[TSB2][tryptophan synthase beta-subunit 2]
Gene coexpression
MR
MR Locus Description
5.38516 Ahg904747 Protein of unknown function (DUF760)
8.66025 Ahg934080 FAD-binding Berberine family protein
9.16515 Ahg487773 mitochondrial HSO70 2
14.8997 Ahg923670 peptidase M20/M25/M40 family protein
18.1659 Ahg482690 PHE ammonia lyase 1
18.3303 Ahg938669 Calcium-dependent phosphotriesterase superfamily protein
20.4939 Ahg914030 methionine gamma-lyase
22.0907 Ahg487818 ABC transporter family protein
26.9815 Ahg920808 Protein of unknown function (DUF962)
29.3258 Ahg484876 arogenate dehydratase 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression