Detail



ID : Ahg934192

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934192|scaffold_402180.1
Sequence
TCTGAAACAA TAGAGGGAAT AATGGAGAGA GTTGATCACC TTGCTGATGA GAGGAACAAA GCTGAGTTCA ACGTCGACGA TATGAAGATC GTCTGGGCCG GTTCCCGCCA CGCTTTCGAC GTTTCAAATC GCATTTCTCG CCTCGTCGCC AATGATCCGA TCTTTGAGAA AAGCAAAAGA GCAGTAATGA GAAGGAAAGA GTTATTCAAG AACACGTTGA GAAAAAGTGT TCACGCTTGG AAGATGATTA ACGAGCTTCG TCTCTCTGAT GAGGAAGGAA TCAAATTAAG ATCTTTCATG GATCAACCAG GCTTCTTGGA TCTGCATTGG GGAATGTTTG TGCCTGCACT TAAAGGACAA GGCACAGAAG AACAGCAACA CAAGTGGTTG TCTCTAGCTA ATAAGATGCA GATAATTGGA TGTTATGCTC AAACTGAGCT TGGTCATGGC TCTAATGTTC AAGGACTTGA GACAACCGCC ACTTTCGATC CAAAGACAGA CCAGTTTATC ATTCACAGTC CAACTCAGAC ATCATCTAAA TGGTGGCCTG GTGGACTAGG AAAAGTTTCT ACTCATGCTG TTGTTTATGC TCGTCTAATA ACCAATGGCA AAGACCATGG TGTCCATGGA TTCATCGTGC AGCTGCGTAG TTTGGATGAT CATTCTCCGC TTCCAGGTAT AACCGTTGGT GATATCGGAA TGAAGTTTGG AAACGGGGCA TATAACTCAA TGGACAATGG TTTTCTTATG TTTGATCATT TTCGTATTCC TAGAGATCAA ATGCTCATGA GACTGTCAAA AGTTACAAGA GAAGGAAAAT ATGTAGCATC AGATGTTCCA AGGCAATTGG TGTATGGTAC TATGGTGTAT GTGAGACAGT CTATTGTGTC AAATGCTTCC ACCGCGCTGG CTCGGGCGGT CTGCATTGCT ACAAGGTACA GTGCTGTTCG AAGGCAGTTT GGCTCACAGG ATGGTGGAAT TGAGACACAG GTGATTGATT ATAAAACACA GCAGAACAGA TTGTTTCCTC TGCTAGCATC TGCATATGCA TTTCGATTTG TAGGGGAGTG GCTGAAATGG CTCTACACTG ATGTAACAAA AAGACTAGAC ACCAGTGATT TCGCAACATT GCCTGAAGCT CATGCTTGCA CTGCAGGATT GAAGTCTATG ACTACCTCAG CCACCTCTGA TGGTATTGAA GAATGTCGTA AGTTATGTGG TGGACATGGA TACTTGTGGT GTAGTGGCCT TCCTGAGTTG TTTGCTGTAT ATGTTCCTGC TTGCACATAT GAGGGAGACA ATGTTGTGTT GCAATTACAG GTTGCTAGAT TTCTGATGAA GACAGTTTCA CAATTGGGTT CTGGAAAGGC TCCTTCTGGG ACAACTGCTT ATATGGGCAG AGCAAAACAC CTTTTGCAAT GCCGTTCCGG TGTTCGAAAT GCTGAGGATT GGTTAAACCC TGGTATGGTG TTGGAAGCTT TTGAAGCAAG GGCTTTGAGA ATGGCTGTTA CTTGTGCTAA CAATCTAAGC AAGTTTGAGA ATCAAGAACA AGGATTCTCA GAACTCTTGG CTGATCTTGT TGAGGCTGCT ACTGCTCATT GCCAGTTAAT TGTTGTTTCT AAGTTTATAG CCAAAGTAGA GGGAAATATT GAAGGAAAAG GAGTGAAGAA ACAGCTCAAG AATCTATGCT ACATCTATGC ACTCTATCTC CTTCACAAAC ACCTTGGTGA TTTCCTCAGT ACAAACTCTG TCACTCCTGA ACAAGGCTCC CTCGCGAACC GCCAGCTTCG GTCACTCTAC TCTCAGGTTC GACCAAACGC AGTGGCCCTA GTGGATGCCT TTGACTACAC TGACCACTAT CTTGGCTCTG TGCTGGGCCG CTATGATGGA AACGTTTATC CAAAGCTTTT CGAGGAAGCG TTGAAGGATC CACTCAATGA CTCGGTGGTT CCTGACGGCT ACCATGAATA CATTCGACCG TTGATTAAGC AACGCTTCCG CTCTGCCAAA CTCTAACTCT TTCTTTGTTC GGCTAA 
Length2036
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16049395.. 16052364
Download Sequence
A.thaliana
AGI-codeAT2G35690.1
Descriptionacyl-CoA oxidase 5
TAIR curator summaryEncodes an acyl-CoA oxidase. Involved in jasmonate biosynthesis. Expressed uniformly in seedlings and throughout development.
Alias[ACX5][acyl-CoA oxidase 5]
Gene coexpression
MR
MR Locus Description
5.83095 Ahg892416 DNAse I-like superfamily protein
8.18535 Ahg949484 ferric reduction oxidase 6
8.94427 Ahg470572 Uridine diphosphate glycosyltransferase 74E2
11.225 Ahg943085
11.3578 Ahg493689 Homeodomain-like superfamily protein
16.9706 Ahg887877 Disease resistance protein (CC-NBS-LRR class) family
17.4929 Ahg484500 chloride channel B
18.4391 Ahg474355
20 Ahg492888 Glycosyl hydrolase family protein with chitinase insertion domain
24.9199 Ahg478149 zinc finger (CCCH-type/C3HC4-type RING finger) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression