Detail



ID : Ahg935564

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935564|scaffold_403552.1
Sequence
TTGATGATGT TAGATACATA TTGAGGATGG CTAACAAAGA GGATCGTGAG GAGCATCCTC CTCGTGGGAA TGAATGGGAA GTCGTCTCGC TTACTTCTTC AGCTTACGCT GCTGCTCCTG GTCCGTATAA CGTTGAATCA AGAGATTTGC GCAAGTATGA TGCTTACTAT GGAGCAGAAA CTTCACGTGA TCTGTACATG TCTGAACACT TTGTATTCCC ACCTAGCGAG CATGAGAATT TACCCATTGA TGAACATTTA TTCAAGGAGG AGCAAAGAAA GGATGGCGGA GACTTGATGC TCGAAGGCCA GGGATTGTCT GATCAGTTTC ATTATGAAGC TGGAAACAAC CAACAGAGTA TCTATGGTGA ATCTGCGCTT GGTTCTTCTA GACACATGGA ATCATTCGGA AGTGAATCAG CCATGTATGA ACACGGGTTA GTTGATGCCG AGCCAAATGA GTATGCAGAG GGAAACTTAG ATCTCCATTC TGATACCGAG GGCGAAAAAG ATGCCGAAAA ATCAACGCAC AACCTTCCTT GTGAAGCTTG GTGGAAAAGG AGAGCTATTT CTATGTATTC ACGCACAAGA GAAGCAAACG CGATATGGTC CTTATTCTTT GCAGCTGCAG TCGCAGGACT CGTAGTTCTT GGTCAACGCT GGCAACAAGA GAGGTGGCAG GTTTTGCAAC TCAAGTGGCA ATCAAGCATC AGTAGCGAGA AACTGAGCAG AGTACTCGAA CCTCTCTCGC GCTTGAAAGA CGTGATTGTG AGAAGTAACC CACAAGCTTC GCTCGTAAGG AGTGGTTCAT CCAGTGAGGT CTAGAGGCAA AGTATGATAA ACTC 
Length844
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21211993.. 21212934
Download Sequence
A.thaliana
AGI-codeAT2G45980.1
Description
TAIR curator summary
Alias[ATI1][ATG8-interacting protein 1]
Gene coexpression
MR
MR Locus Description
5.19615 Ahg497125 Chaperone DnaJ-domain superfamily protein
16.1245 Ahg317081 SNF1 kinase homolog 10
20.8327 Ahg485584 Dihydrolipoamide acetyltransferase, long form protein
21.3542 Ahg482524 ubiquitin 7
29.4958 Ahg479772
34.0734 Ahg471880
38.1838 Ahg929508 Tetratricopeptide repeat (TPR)-like superfamily protein
48.7852 Ahg476847 tubby like protein 1
51.672 Ahg474047 stomatal cytokinesis defective / SCD1 protein (SCD1)
52.7447 Ahg317751 Major facilitator superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression