Detail



ID : Ahg935766

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935766|scaffold_403754.1
Sequence
CAACGGCTCC AAGTTTTTGA CAATGGCTGA AGAAGATGAG ATAGTAGTCG AAGAAGAGCA ATCACAGCCA CCGGAGGTTA CTCCAGTGCC ACCATCTTCT TCGCCCTCGC CTTCGTTAGT GGTGGAAGAC GACGATGAGA TGAAGCTCAA GCACTTGGAA TTCATCCAAG TCGCGGCGGT TTACTTCGCC GCCTGTTTCT CCACGCTCTA CGAGTTGGCT AAAGACAACG CTGGTCCCCT CCAACTCGGT GTCGAAAACA TCGAAGATTC CGTTCGAACC GTGCTTGCTC CATTATACGA CAAATTCCAC GACGTTCCTT TCAAGCTTCT CCTCTTCGTC GATCGTAAGG TGGACGATGT GTTCTTCGAT GTTGAGACAT ACGTTCCTTC GCTGGTGAAG CAAGCTTCTA GCCAAGCACT CACGGTGGCC ACAGAGGTGC AACGCGCCGG CGTTGTGGAC ACCACCAAGA GCATTGCGAG GAGCGTCCGG GACAAGTACG AGCCTGTGGC AGAGTATTAC GCTGCGACGC TGTGGCGTTT ACTGAATCAA GTGCCCTTGT TCCCTGAAGT TGCGCATTTA GTGATCCCCA CGGCGTTTTA CTGGTCAGAG AAGTACAACG ATGCTGTTCG TTACGTTGGC GACAGAGACT ACTTTGGGGC AGAGTATCTA CCCATGATTC CTATTGAGAA GATCTCTGAT ATTTTGGAAC AAGATCAGTG TCGATCTGAC TAAGAAGCCA AAGATTCCTT CTT 
Length753
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21980092.. 21980914
Download Sequence
A.thaliana
AGI-codeAT2G47780.1
DescriptionRubber elongation factor protein (REF)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.2337 Ahg479964 heat shock transcription factor C1
28.2843 Ahg950385 Nucleotide/sugar transporter family protein
30.6594 Ahg929605 Late embryogenesis abundant protein (LEA) family protein
32.5576 Ahg491190 squalene synthase 2
33.3766 Ahg905237 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
34.8999 Ahg490602 expansin-like A2
37.3363 Ahg945603 HVA22 homologue D
40 Ahg940349 Transcription initiation Spt4-like protein
53.6656 Ahg887750 F-box/RNI-like superfamily protein
61.4003 Ahg921726 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression