| Annotation |
|---|
| Description | jgi|Araly1|491190|fgenesh2_kg.7__623__AT4G34650.1 |
| Sequence |
ATGGGAAGCT TGAGTACGAT TTTGAGACAC CCGGATGAGT TATATCCGCT CTTGAAGTTG AAACTTGCGA TTACGAAAGC TCAGAAGCAG ATCCCACTAG AGCCACACTT AGCTTTCTGT TATTCAATGC TCCACAAAGT TTCTAAAAGC TTTTCTCTTG TTATTCAACA ACTTGGCACC GAGCTTCGTA ACGCAGTGTG TGTGTTCTAC TTGATTCTCC GAGCTCTTGA TACTGTTGAG GATGACACAA GCATACCAAT GGAAACCAAA GTTCCAATTC TGATAGCTTT CCACCGTCAC TTATACGATG GTGGCTGGCA TTTCTCATGT GGTACAAAAG ATTACAAAGT TCTAATGGAC CAATTTCACC ATGTTTCTGC AGCTTTTCTG GAACTTGAAA AAGGGTATCA AGAGGCTATT GAAGATATAA CTAAAAGAAT GGGTGCAGGA ATGGCCAAGT TCATTTGCAA GGAGGTAGAA ACAATTGATG ACTATGATGA ATACTGCCAT TATGCTGCAG GACTTGTGGG TTTAGGTTTG TCAAAAATCT TCATCGCTTC GGAATTGGAA ATACTGACTC CAGATTGGAA GCAGATTTCA AATTCTACAG GTTTATTTCT CCAGAAAACA AACATTATCA AAGATTATCT TGAAGACATT AATGAGATAC CAAAATCGCG CATGTTTTGG CCTCGTGAGA TTTGGGGGAA ATATGTTGAC AATCTCGAGG ACTTAAAAAA TGAGGAGAAA TCAACACAAG CAGTGCAGTG TCTAAATGAA ATGGTCACTA ATGCGTTGAC TCATGTTGAA GATTGTTTGA AATCATTGGC TTCATTGCGT GATCCTGCAA TATTTCAGTC TTGTGCCATC CCTCAGATCG TGGCGATTGG AACACTTACA TTATGCTATA ACAATGTAAA AGTATTTAGA GGCGTCGTGA GACTGAGACG AGGTCTAATA GCTAAAGTAA TTGATCGCAC AAAGACAATG GATGATGTCT ATGGTGCGTT CTATGATTTT TCTTGCATGC TACAAACAAA GGTTGACAAG AACGATCCAA ATGCCATGAA AACATTAAAC CGACTCGAAA CCATCAAGAA AGTTTGCAGA GAAAATGGAG TCCTTCACAA AAGAAAATCT TATGTTAACG ATGAAACACA ATCCAAGGCT ATCTTTGTTG TAATGTTTGT GCTTCTACTG GCCATAGTCG TTGTATATAT ATCTCGAAGC AAACCAACGT AAATGACTCT GATTGTGTGA AGTCATCATA AACATAATTT CTAGCTTCTT TG |
| Length | 1292 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 2513337.. 2515996 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G34650.1 |
| Description | squalene synthase 2 |
| TAIR curator summary | Encodes a protein with similarity to squalene synthase which catalyzes the first committed step in sterol biosynthesis. To date no experimental evidence exists that SQS2 functions as a squalene synthase and some experiments indicate it does not have this function. |
| Alias | [SQS2][squalene synthase 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.91608 |
Ahg905237 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| 6.78233 |
Ahg945603 | HVA22 homologue D |
| 9 |
Ahg917411 | autoinhibited Ca2+ -ATPase, isoform 8 |
| 11.0905 |
Ahg486390 | pirin |
| 12.3288 |
Ahg929555 | Plant invertase/pectin methylesterase inhibitor superfamily protein |
| 17.3205 |
Ahg494585 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| 19.4422 |
Ahg350602 | high affinity nitrate transporter 2.7 |
| 20.1246 |
Ahg488447 | stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) |
| 20.3961 |
Ahg949787 | low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A) |
| 21.2838 |
Ahg325669 | Protein kinase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|