Detail



ID : Ahg945750

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|945750|scaffold_701979.1
Sequence
TAGAAAGAAA GAAGTAAGAA ATGGCAACCC TTAAGTGCAT TGACTGGCAA TTCAGCGGAA GCGAGGCGGC CAAAGAAGCT GCCGGGGCCA GCTTAGGCAC ATATACCTCT GCACTCTATG CTATGTGCGA TCCTAATGGC AAACCCATTT TGCCCCCACG AAATGAGATC CTGGAGACCA GCAATACAGC CGAAAAAGCA GTTGTTAAAG CCGTTCTTTA TGGCACGGGA AACGCCTATG CTCCTAGCGT TGGCCTCGCG GCCGCCAAAC GTGCTGTAGC AGAGTATCTA AACCAAGGTC TTCCAAAGAA GCTTACAGCA GATGACGTGT TTATGACTCT TGGATGCAAA CAAGCCATTG AGCTCGCAGT AGACATTCTG GCTAAACCGA AAGCCAACGT TTTGCTTCCG AGTCCTGGCT TCCCATGGGA CGTAGTCCGC TCCATCTACA GGAACCTTGA GGTCCGCCAC TATGATTTCC TTCCCCAAAA GAACTTTGAG ATCGACTTTG ATAGCGTCCG AGCGCTCGTG GACGAGAACA CGTTTGCGAT ATTTATAATC AACCCCCACA ATCCCAATGG GAACACCTAC TCCGAGGCTC ATCTCAAACA GCTCGCTGAA TTGGCTAAGG AACTCAAGAT CATGGTGGTT TCTGACGAGG TTTTTAGATG GACACTCTTT GGGAGTAACC CTTTTGTTCC GATGGGAAAA TTCTCATCGA TCGTACCAGT GGTTACACTT GGATCCATAT CAAAGGGATG GAAAGTTCCA GGATGGCGAA CTGGCTGGCT CGCGCTGCAT GATCTAGATG GTGTCTTCAG AAACACCAAG GTCTTACAAG CTGCACAAGA ATATCTCCAG ATAAACAATA ATCCTCCGAC TGTTATCCAG GCGGCTATTC CTGACATCTT GGAGAAAACT CCTAAAGACT TCTTCGATAA GAGGCAAAGT TTTCTGAAAG ACAAAGTAGA ATTTGGTTAT TCTAAGCTCA AGCACATACC TAGCCTCACT TGCTACATGA AACCTGAAGC GTGCACCTTC TTATGGACCG AGCTTGATTT ATCGAGCTTT GTGGACATCG AAGATGATCA AGACTTTTGC AATAAGCTTG CTATAGAAGA AAACCTCGTC GTTTTACCAG GGATTGCATT TAGTCAGAAG AACTGGTTGA GGCATTCTAT CGATATGGAG ACTCCGATAT TGGAGGATGC AATGGAAAGA TTGAAGAGCT TCTGTGATCG CCATTCCATT AAAGAAGCTC CACTCAAAGA CGTCAATGGT GTCAACTAAA GGGTCAATAC GGATCTTTG 
Length1309
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7433586.. 7435945
Download Sequence
A.thaliana
AGI-codeAT4G23600.1
DescriptionTyrosine transaminase family protein
TAIR curator summaryEncodes cystine lyase which is expected to be involved in amino acid metabolism, providing the plant with cysteine and the generation of precursors of ethylene biosynthesis. mRNA levels are elevated in response to wounding.
Alias[CORI3][JR2][CORONATINE INDUCED 1][JASMONIC ACID RESPONSIVE 2]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg923674 IAA-leucine resistant (ILR)-like gene 5
8 Ahg472193 chlorophyllase 1
11.5326 Ahg936257 allene oxide cyclase 1
12.6491 Ahg489339 vegetative storage protein 2
14.1774 Ahg355235 hydroperoxide lyase 1
15.4919 Ahg474366 TSK-associating protein 1
16.4924 Ahg479107 Mannose-binding lectin superfamily protein
19.8997 Ahg493370 beta-amylase 5
20.347 Ahg927270 Sodium Bile acid symporter family
21.9089 Ahg490462 TRICHOME BIREFRINGENCE-LIKE 26
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression