Detail



ID : Ahg936615

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936615|scaffold_500806.1
Sequence
AGGATTGATT TTTAACAATC ATGTGGCTTT CCTTCTTAAG ACCCAGAGAT CGATTCTCCT TAGCCGAACT CAGGTATCTG ACTGACCAGC TGAGAAAGAT TCAGATAGTG AACGATGCTA ATAAGGATCT CGTTGTCGAG GCACTGAGAT CGATTGCGGA GATATTAACT TATGGTGATC AGCATGACCC CTTATTCTTT GAATTTTTTA TGGAGAAACA AGTAATGGGA GAGTTTGTAC GTATTTTGAG GGTTAGCAAG ACGGTAACAG TTTCCGTACA GTTGTTGCAA ACCATGAGTA TTATGATCCA AAACCTAAAA AGTGAACAAG CCATCTATTA CTTGTTCAGT AACGAATATG TAAACTATTT GATAACATAT ACATTTGACT TCCAACACGA AGAGCTTCTA TCTTACTACA TATCCTTCTT AAGAGCTGTT AGTGGGAAGC TAAACAAGCA TACAATATCA TTGCTTTTGA AGACCGAGAA CGATGTAGTA GTTTCTTTCC CCCTTTATGT CGAAGGCATA CAATTTGCAT TTCATGAAGA GAACATGATA CGCACTGCAG TTCGTGCCCT GACTCTTAAT GTATATCACG TTGGCGATGA ATCTGTGAAT GATTATGTAG TTAGTCCACC GCACACCGAG TACTTTTCAA AATTAATTTC ATTTTTCCAA AAGCAATGCA TGGATCTAAG TGCAATGGTG TTGAACACTC TAAAGAGCCC ATCTCCGGAT TCAGGTGGAA AATTGTTTTC TGCCGTTGAT GGGATTGAGG ACACCTTGTA CTACTTTAGT GATGTTATCT CTGCTGGCAT ACCTGACATC GGGAGGCTGA TAACAGATCA CATTCTGCAG CATCTAACTC TCCCACTTCT TCTCCCGTCT TTATGCTCCG AGGCTGTAAA TGATATGTCA GTTGATCCTG TCACTTCTCT CTACCTGCTT TCTTGCATCC TGCGGATAGT TAAAATTAAA GATTTGGCAA ATATGACTGC TGCTACTCTT TTCTGCCCTG TAAAAGCATT CATTTCAAGT TCCCTGGTGA AACCTAATAA CAGCTTGGCT CCTGAACTCC TTACATATGG AAATGGGCAT CCAGACAAGG GTGTTGCTGA GGAGGCAGAT CAACAGTGTT CAAGCACTGC AGTCATGAGT GAGGATGGAA AGTCTCACGT TTGCAGTGAA AATACTCCGA AAAGTATCTT CAACAATTCT CATATGACGT TTAGGGAGAC TTTACTTCAG TATATTTCTG AGGGAGATGA TGTACAAGCT CAGGGTTCCT TGTTTGTGCT AGCCACTTTG CTGCAGACAA AAGAACTTGA AGAGTCAATG CTAGATGCTT TTGGTATTCT TCCTCAGCGT AAGCAGCACA AAAAACTTTT GCTGCAATCT TTGGTTGGGG AGGACACTGG TGAAGAACAA CTTTTTTCAC CGCGAAATGG TTCAATGAGA GATGGCTTAA GTAGTGAACT TGATTGGTAT CTACGGAGGT TGGAGGAGCA GTTTGGAGTG TGCTGTTCAT TGCCTGGGGC TGCAAGGTGC CCCCGTGTAC ATAGACATCA GGTGGTGGAT ACATTGGTCA CTCTTCTCTG CCGAGAAAAC ATATCTGCAG AAACATTATG GGATGGAGGA TGGCTTTTAC GCCAATTGCT TCCTTATAGC GAGGCAGAAT TTAATCGCAA ACATCTCAAG ATGCTGAATG TTTCGTATGA GAAATGCAAA AGTGCCCTTA CCCGGGAAAT TAAAGGTACC TGGCCTGATC TACTTATCAC AGTACTGCTT GATGAGTGGA GAAAGTGCAA AAGAGTAATC GAAGCTCCAT CCCCTCAAAA AGAGCCTAAA TCTGTTCTTC TCCAGCTGGA TAGATCCTCT TCTAATGATG CTGTTAGCGA ATCATCATTC ACAGCTGGTG AAAGAATGTG CGAGGTGGTA AAGGTTTTCG TGCTTCTTCA TCAACTCCAA ATTTTCTCGC TCGGTAGGCC CTTACCCGAG CAGCCTCCGA TTCACCCTCC AGCCAACCGA TCTGAAACGT CTCGTGCCAC AATTGCTGGT TTGGATGTTT CAGTCCCCAA ACCTGGCACC GAACTGAAGC TAGTTGATGC TGTACCCTGT AGGATTGCCT TTGAAAGAGG CAAGGAACGT GATTTCTCGT TTCTAGCATT ATCATCTGGT GAGTCTGGGT GGATTGTCCT TGCTGATCCA GATAACGGAA TCGTCCGTGT AACCGCACCT TTAGCCGGCT GCAAACCCCG AATTGACGAA AAGCACCCCA AATGGCTACA CTTGAGAATT CGACCATCTA CATTACCGTT GTTGGATCCA ACAAAGCGAG GAGTCTATGA GAAGCTCATG TCTAAAGGTC TAGTAGACGG GAGATGGATA TTAGCATTCA GGGATGATGA ATCTTGCCTC TCTGCTTACT CAATGGTTGC AGGTGAGATC GATCAACAAT GCAGCGAGGT AGAACGAAGA CTAAGGCCAT TGTTTGACCT AGAACGAAAC CAACAAGAAG ATCAATGAAA CATCACACTT CCGATGCATT 
Length2550
Protein Sequence
Protein Residue
Map Locationscaffold_5: 4331891.. 4337017
Download Sequence
A.thaliana
AGI-codeAT3G28430.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg488886 PRLI-interacting factor, putative
2.82843 Ahg484401 Melibiase family protein
10.3923 Ahg485847 SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein
12.6095 Ahg950645 myosin heavy chain-related
13.7477 Ahg494338 O-acetyltransferase family protein
18.7617 Ahg492898 RING/U-box superfamily protein
22.2711 Ahg486155 Protein kinase superfamily protein
26.1151 Ahg935061 phospholipase D beta 1
27.4955 Ahg324798 Protein kinase superfamily protein
27.6948 Ahg940499 leucine-rich repeat transmembrane protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression