Detail



ID : Ahg492898

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492898|fgenesh2_kg.7__2331__AT4G19670.2
Sequence
ACGCCATTCG AAGAGAGAGC AAAACCAGAA AAACGGATGA TTCTTCTTCT TCTTCTTCTC TCCACAAAAC CAGTAGAAAC ATCCAAAACA ATGAGTTTAC TTTTTTTTTG TCTTGGAAAA AAACAGAGAT TTTGAAGATG TTAGCTTACT TCCAAGTGTA AATCTTCTTC CACTGATCCG ATTTGGGTTT GCTTAGTTTG TTGCTAAGTT AAGAAAGTTT GTACCTTTTT GTAGTTTAGT TGGGTTGTTG CCAAACATGG AAAATCAAGA GGATTCTTGT GGATGTGAGG AGCTTCCATT GAATCATATA GGAGATGAGG AAGAGTTTAG AAGCTGTTGT GGTGATGAAG AAGTTTGGTT AAAGGAGAGT GATGATACAG TTAAAGTTGC AGAGGAGGAG AAAAAAGATG AACTTGATGA TGAGTTCTCT GTTAAGGTTT TCTTTAAAGG AGTTTCGATA TCCGAAAAAG GAGATTCGGG TTCCGGTTAC TCGGGAATTG GTGTTGTGTT GGAGAGATCT GGAGATTTTG AGTTGATTCA GGTTCAGAAG AAGTTGGATT TTTATGCTGA AGAGTCTGTA GCTAACTATT TGGCTCTTAT GGATGGTCTT GAAGTAGCTT TACAGAATAA TCTCCCCTCT GTGGTTGCTG TAACCGACTC CGAATTGCTC TATAATCAGA TAACTCGTGA GGAGCAGCTC GAGATCCCTC TTTTGGTAGC TCTGAGAGAA AGGGTATTGG AGAAAACAAG TAACCTTGAT GGGTTTGTTC TAAAGCTTGC TCCTTTCTGT GATCTCGATG AAGCTCTAAG CTTGGCTCAA GTAGCGGTAG GAATCGTGTC TTCTAATCTC GATGGGGATA AACCAACCGA GAACTGCTCG ATCTGCTGTG AAGACCGTCA GTCTGAGATG ATGCTAACAT TGAAGTGCAC TCACAAATTC TGTTCGCACT GTATGAAAAC ATATGTCGAA GGGAAACTAC AGTCTTCGGA AGTTCCCATC AGGTGTCCTC AAGTGCAATG CAAGCATTAT CTCTCAGCCA CAGAATGCAA ATCGTTTCTG CCCGTTGCTA CTTTCAAATC ATTCGAGGAA GCAAATGTGC GTAGTAAGAA CAATGGCAAG ATTTACTGCC CATATCCCAA TTGCACTTTT CTATTAGACC CGCAAGAATG TCTATCATCA GGAAGGGCAA GCTCAAGCTC GTCTACTCAG TCAGAGAATA GCTGCTGTGT GGAGTGTCCG GTCTGTGAGA GGTTTGTTTG TGTAGACTGT GGTGTTCCTT GGCATGCTTC TATGAGCTGT GAAGAGTTTC AGATTCTTCC GGTTGATGAA AGATATCCAG ATGATATTAC ATTGCATCGC TTGGCAAGGT ATAAGAGGTG GAGACGATGT CAGCAATGCC GTATAATGAT CGAGCTTGCT CAAGGCTGCA ACCACATGAC TTGCCGGTGC GGGCACGAGT TTTGCTACTC GTGTGGAGTA GAGTACAGAG AAGGGCAACA GACTTGCACT TGTGCTTTTT GGGACGATGA CGAAGAAGAT CAAGAAAACT CAGTTGAGGA ACACACAATT CAAGAAGTTG AGCAATGGCC TTGGGACACA TTTAACTCAA TTCCAACTGT AATGGACGCT TACTCAGAGC AAGAAAGATC TCAGCTTGCT CTGATCCAAA GGTTCTTAGC AGGTGGAGGG TTTAGTCTCA GTGATCACCA TACTTCTTAT CAGTCACCGC CGCCTCCATG TACAGAGTCA TCATATGTTG AAGCCGCCAT GAAAGATCTT CATCAGCTTC CTTGGCTTGA GAGGTTTGTG TCTGTTATAA GTGATGATTA CTATGAAGAG TATAATAGCC AGTGAAAGGA GTAGAATGGT AATTTAATAG CTTTGAGGAT TCGGTTTGGT TTGGTTCGGC GAGGCCAAAC GAGAGTATCT CGCTCTCGAA AGAAATTGTT GGGGGGTTTT TAGATTCTTG ATGAACTCAA ACAA 
Length1984
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9433045.. 9435861
Download Sequence
A.thaliana
AGI-codeAT4G19670.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg494615 myosin 2
7.87401 Ahg484429 Tetratricopeptide repeat (TPR)-like superfamily protein
8.12404 Ahg474776 lipoxygenase 1
8.3666 Ahg941995 Calcium-dependent protein kinase (CDPK) family protein
14.6969 Ahg487239 HhH-GPD base excision DNA repair family protein
15.3297 Ahg938262 Leucine-rich repeat protein kinase family protein
18.7617 Ahg936615
20.3961 Ahg473587 alpha/beta-Hydrolases superfamily protein
22.5832 Ahg934879 Protein kinase family protein with ARM repeat domain
30.9193 Ahg481381
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression