Detail



ID : Ahg937371

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937371|scaffold_501562.1
Sequence
TTCTAGTGAG ATTCTGTTTC ATGGATGCTA TTTTGCCAGT ACCTGTTGAT GGGTTCAGAT TCGACAACGG TTCTGGATCT TGTTGCAAAC CAAGGAACAA TCTTGAATCT GGTACTACCA ATCGTTTCAC TTGTTTCAAC GAATCTGAAT CTCAGAGCAA CCCTTCTCCG ACCGAGTCTA AGGTATGTTC AGATTACCTC CCTGTCTTTA AGTACATCAA TGACATGTTG ATGGAAGAAG ATCTTGAAGG ACAGTCTTGT ATGTTGGAAG ACAGTTTGGC TTTACAAGCC GCTGAGAGAT CTTTCTATGA AGTACTTCAG GATCAAACTC CTCCACCGTC TGATCAAATC TCTGGTGATC TAGAGGATGG TTCTCTTGGA AACTTCAGTT CTATAACGAG TTTGCATCAA CCTGAAGTTT CAGAGGAGTC AACCAGAAGG TATCGACACA GGGATGATGA TGAAGATGAT GATTTTGAGG GTGGAAGGAA ATCGAAGCTT CCTGCAATAT CTACTGTGGA TGAGTTAGCA GAGAAGTTTG AGGAAGTGTT GTTGGTATGT CAAAAGAATG ATCAGGGAGA AGCAACAGAG AAGAAAACAA GACAAGCAAA GGGTTCATCG AATCGATCCA AGCAGCAAAA GTCAGATCAG CCAGTGGATA TGAGGAACCT TTTGATGCAA TGCGCGCAAG CTGTGGCGAG CTTTGACCAG AGAAGAGCTT CTGAGAAACT CAAGGAGATA AGAGAACACT CTTCTAGCCA CGGCGATGCA ACTCAGAGAC TTGGTTATCA CTTCGCTGAG GCGCTTGAAG CGCGTATTAC TGGAACCATG ACTACACCAA TATCTGCTAC TTCTAGTAGA ACATCAATGG TGGACATTTT GAAGGCGTAC AAGGGGTTTG TTCAGGCTTG TCCCACCTTA ATAATGTGTT ATTTCACTGC AAACAGAACA ATTGTTGAGC TTGCTTCCAA AGCAACCACA CTTCACATCA TTGATTTTGG GATCCTCTAT GGATTTCAGT GGCCTTGTCT GATACAAGCT CTTTCAAAAC GTGACATCGG ACCACCACTG CTCCGTGTGA CAGGTATCGA GCTGCCTCAG TCAGGCTTCC GCCCATCAGA GCGGGTAGAA GAGACCGGGC GAAGACTGAA GAGATTCTGT GACAAGTTCA AAGTCCCGTT TGAGTACAGT TTCATAGCCA AAAACTGGGA GAACATAACT CTTGATGATC TGGTGATCAA TAGTGGAGAG ACAACAGTTG TCAACTGCAT CCTCCGGCTA CAATATACGC CTGATGAAAC CGTGTCCCTC AACTCACCAA GAGACACGGC TCTGAAACTA TTCAGAGATA TCAATCCTGA CCTCTTTGTG TTTGCAGCGA TCAACGGGAC GTACAATTCG CCCTTCTTCC TAACAAGGTT CAGAGAAGCT CTGTTCCATT GCTCATCACT CTTTGACATG TATGAGACCA CATTATCAGA AGACGACAAT TGCAGGACCC TGGTGGAGAG GGAGCTAATC ATAAGAGATG CAATGAGTGT GATAGCCTGT GAAGGGTCTG AGCGGTTTGC AAGGCCCGAG ACATACAAGC AATGGCAGGT TAGGATTTTA AGAGCCGGGT TTAGACCAGC GAAACTAAAC AAACAGATCG TAAAGGACGG GAAAGAAATA GTGAAACAAC GTTACCACAA AGATTTCGTG ATCGACAACG ATAACAACTG GATGTTTCAG GGCTGGAAAG GAAGAGTCCT CTATGCTGTT TCCTGCTGGA AACCTGCTAA GAAGCAATAA ACAAATCTGT AGTCATTTGC 
Length1810
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12091674.. 12093483
Download Sequence
A.thaliana
AGI-codeAT3G46600.1
DescriptionGRAS family transcription factor
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.38516 Ahg486038 salt-inducible zinc finger 1
6.48074 Ahg472633 Protein of unknown function (DUF1645)
8.83176 Ahg908904 Toll-Interleukin-Resistance (TIR) domain-containing protein
10 Ahg484948 mitogen-activated protein kinase 3
12.8062 Ahg489028 5'-AMP-activated protein kinase beta-2 subunit protein
13.0767 Ahg482632 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
20.445 Ahg926342 trehalose-6-phosphatase synthase S8
22.1811 Ahg493041 receptor serine/threonine kinase, putative
22.4499 Ahg472202 purine permease 14
23.2379 Ahg910021 Protein phosphatase 2C family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression