| Annotation |
|---|
| Description | jgi|Araly1|938089|scaffold_502280.1 |
| Sequence |
TCTTTCCTCC AATAGGAGAA ATGGCTGGGA AGTCGAACAA ATCGAAGGCC AAGAGAGCGG CTCAGAGCTC TACCACCAAT TCTACTGATG TTAAATCCGA TGCTCCTGTC ACTGCTCCGG TTACTGCCCC TGTTACTGCC CCTGCTACTG CTCCGGTTAC TGCTCCCGAT AACGGCACCG CCAATGCTGT TGACTCTGCG GTGTCTGAAG CCAATGAAGT TCCTCCTACG ATTCCTAAGG CTGACGAAAG TGAATCACAA GTAGCAAACA ACGATGCCCA ACCCAAGCAA GGTGAACTCC GTCTTTATCC TGTGTCTGTC AAAACACAAA GTGGGGGTAA AATGGAGCTT CAATTGAACC CTGGAGACTC TGTGATGGAT ATAAGGCAGT TCCTCCTTGA TGCTCCAGAG ACGTGCTACT TCACTTGTTA TGAGTTGTTA CTCCGCAATA AAGATGGAGA GACTCATCAT TTGGAAGACT ACAATGAGAT CTCTGAAGTA GCTGACATCA CCCTTGGTGG TTGCTCCTTG GAAATGGTTG CAGCATTGTA TGATGATAGA TCTATCAGAG CGCATGTTCA CCGTGCCAGA GATCTTTTGT CGCTTTCAAC ACTTCACTCT TCCTTATCAA CAACACTTGC CTTGCAGTAT GACGCAGCAC TGAACAAAGT TCAGAACCCC GGAGATAAAC CAAAGTCTGA CGTTCCAGAG CTGGAATGTT TGGGTTTTAT GGAAGATGTG CCTGGCTCTC TCAGGAAGTT AATAAATTCT ACATCAGAAG AGATCAAATC TGTGGAAAAC ATTGTGTTCT CATCGTTCAA CCCTCCTCCA AGCCACAGAA GGCTTGTAGG AGATTTAATA TATTTGGATG TTGTGACCTT GGAAGGTAAC AAGTACTGCA TTACAGGCAC AACAAAAACA TTTTATGTTA ATTCCAGCTC AGGGAATATT CTCGATCCAA GGCCAAATAA ATCTGGACAT GAAGCAGCTA CGCTGATTGG ACTATTGCAA AAACTTAGCT CTAAGTTTAA AAAAGCTTTC CGTGAAGTCA TGGAAAAGAA AGCCTCTGCT CATCCGTTTG AAAATGTTCA ATCGCTTTTG CCACCACACT CATGGCTAAG AACTTATCCA GTACCCGATC ACAAGCGTGA TGCAGCGAGA GCAGAAGAAG CACTTACCAT TTCCTATGGT AGTGAGTTAA TTGGCATGCA GAGAGATTGG AACGAAGAGT TGCAATCTTG CAGAGAGTTC CCTCACACTT CTCCTCAAGA GAGGATCTTA CGTGACAGGG CACTTTACAA AGTGTCTTCT GATTTTGTCG ATGCAGCGCT TAACGGAGCT ATTGGTGTAA TCAGCCGTTG TATACCACCC ATAAACCCAA CTGATCCAGA GTGTTTGCAC ATGTATGTGC ACAACAACAT CTTTTTCAGT TTTGCTGTTG ATGCCGACAT TGAACAGCTC TCCAAGAAAC GTCCATCTAA TCAAGTGACG GAGAAGGTGT CCTCATCTGA AAAGGTTTCA TGCACAGATG CAACCTGCGA TAATGAAGAG CATAACAGCT GTAATGAGGC GCCACTTGTT GAAAATGAGC AGGCAACGTA TGCCTCTGCA AACAATGATT TGAAAGGCAC AAAGTTATAT CAAGAAGCAG ATGTCCCAGG GCTATATAAT CTGGCAATGG CCATTATTGA TTACAGAGGG CATAGGGTTG TTGCTCAGAG TGTTCTACCG GGAATCCTTC AAGGGGATAA ATCAGATGCG CTTTTGTATG GTTCAGTCGA CAATGGCAAG AAAATATGCT GGAATGAAGA TTTTCATGCT AAGGTGCTAG AGGCTGCAAA GCTTCTTCAC ATTAAGGAAC ATTCTGTTAT TGATGCATCC GAAACTGTCT TCAAGTTGGC TGCGCCAGTA GAGTGCAAGG GGATTGTTGG GAGTGATAAC AGGCATTATC TCTTGGACTT GATGAGAGTG ACGCCTCGTG ATGCCAATTA TACGGGTCCA GAGTCCCGCT TTTGTGTTCT AAGACCAGAA CTGATCACAT CATTTTGCCA GGCCGAATCA TTGGAAAAAT CGAAATTGAA AACCAAGACT GATGAAGGGG CGGATGATTC TTCTAATGTT AGTGCTGATA TTTCTAAAGT TGGTGATACA TTGATCGATG GAGAGGAAAA TGGGGCTTCA AATTCTGATC AGAAAACTAT TTCAGACAAG CAAAATACCA CCACCGAAGA TTCTGCAGCC GGGTTGTCTG AAAGTTCCAA ATCATGTGAT GAAATAGCAT TTAACCCCAA TGTCTTCACT GACTTCACAT TAGGTGGCAA TCAAGAGGAG ATAGCTGCTG ATGAAGAAAA TGTGAAGAAA GTTAGCTCAT ACCTTGTGGA TGTGGTTCTT CCAAAATTTA TAGAAGATCT TTGCAGTCTC GAAGTTTCTC CAATGGATGG TCAGACTTTG ACTGAAGCAC TCCATGCTCA TGGTGTTAAT GTTCGTTACA TTGGAAGAGT TGCTAATGGG GTGAAGCATT TGCCTCATTT GTGGGATCTT TGTCTGAATG AGATTACTGT AAGATCCGCG AAGCACATTT TGAAGGACAT TCTAAGAGAC ATAGAGGATC ATGATATTGG ATCAGCAGTC TCACATTTCC TCAATTGTTT CTTTGGAAAC TATCAAGCTG CTGGGGGAAA AGCTAGTGCC AAAAATCAAA AGAAGGATCA ACCCATCACA AAGAAGGGTC AAGGAAGAGG GAAGGGAAAA TCTTCTTCAA AGAAAAGCTT TTCATCGTAT ATGATGGTTG ACTCCAACAT TCTATGGTCT GACATTCAGG AATTTGCCAA AGCTAAATAT GAGTTTGAGT TGCCTGAGCT ATCAAGAACT ACGGCTAAAA AAGTATCTGT TCTTCGTAAT CTTTGCCAAA AGGTTGGTGT CAGTATTGCT GCACGCAAAT ACGACTTCAG TGCAACCTCG CCTTTTGAGA CGTCAGATAT TTTGGATCTT CGGCCCGTAA TTAAGCACTC TGTCCCTGTA TGCTGTGAGG CTAAAGATCT TGTTGAGATG GGAAAGGTCC AACTGGCTGA GGGCATGCTT AGTGAATCCT ACACGTTCTT TTCAGAGGCA TTTTCGATAC TTCAACAGGT GACTGGTCCA ATGCACAGGG AAGTTGCAAA CTGCTGCAGG TACCTGGCCA TGGTTTTGTA CCATGCAGGA GATATGGCTG GGGCCATAAT GCAGCAACAC AAGGAACTCA TTATTAATGA GCGATGCCTT GGTTTAGACC ATCCTGATAC TGCCCATAGC TATGGCAATA TGGCTCTTTT CTACCATGGA CTGAATCAGA CAGAACTTGC TCTACAGAAC ATGGGTCGAG CCTTGCTTCT CCTTGGCCTT TCATCTGGCC CTGATCATCC AGATGTTGCA GCTACATTTA TAAATGTTGC CATGATGTAT CAAGACATGG GCAAAATGGA CACAGCTCTA CGTTATCTTC AAGAGGCTTT GAAGAAAAAT GAGAGACTTC TTGGTCCTGA ACACATTCAG ACTGCAGTAT GCTACCACGC TCTTGCCATT GCGTTCAACT GTATGGGCGC ATTCAAGCTC TCACACCAGC ATGAGAAGAA AACCTACGAC ATACTTGTTA AACAATTGGG AGACGATGAT TCTAGGACAC GAGACTCTCT AAACTGGATG AAGACGTTTA AGATGCGTGA GCTTCAGATG ACTGCACAAA AGCAGAAAGG ACAGGCAGCC AATGCGGCCA ACACGCAAAA GGCTATCGAT CTCCTAAAGG CACATCCAGA CCTGATACAT GCGTTCCAAA ACGCAGCAGC TACTGGGAGG TCAAATGCAC TGAACTCGGC TGTCCTTGGG GAGACTCAAC CACGGGGCAG AGGTTTTGAT GAAAGAGCAG CTCGTGCTGC AGCTGAAGTT AGGAAGAAGG CAGCTGCTAA GGGGCTACTG GTTCGCCCCC AGGGTGGTGT TCCAGTACAA GCCATGCCAC CACTCTCTCA ACTCCAAAAC ATGATCAATA CCGCCACAGA TTCGTCTGAG AAAGGTGGAG AAAATGGGGA AGCAAAGGTA CAAGAGAAGA AAGAATCCTC TGAAAATGGA AAAACAGAAA ACCTGGCTCC TGCAGGATTA GGTGCTGGTT TAACATCTTT GGATAGGAAG AAGCAAAAAG CCAAAAAATA AGAAAAAGTA GGGATCTTGA A |
| Length | 4201 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 15089066.. 15097091 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G52140.4 |
| Description | tetratricopeptide repeat (TPR)-containing protein |
| TAIR curator summary | |
| Alias | [FMT][NOXY38][FRIENDLY MITOCHONDRIA][non responding to oxylipins 38] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1 |
Ahg472896 | TCP-1/cpn60 chaperonin family protein |
| 6.245 |
Ahg471639 | valyl-tRNA synthetase / valine--tRNA ligase (VALRS) |
| 8 |
Ahg470642 | Ribosomal protein S5/Elongation factor G/III/V family protein |
| 13.0384 |
Ahg473787 | sequence-specific DNA binding transcription factors |
| 16.7033 |
Ahg892406 | DEA(D/H)-box RNA helicase family protein |
| 18.8414 |
Ahg478024 | GTP-binding family protein |
| 20.9762 |
Ahg949667 | ubiquinol-cytochrome C chaperone family protein |
| 21 |
Ahg478562 | GTP-binding family protein |
| 21.6795 |
Ahg937735 | SER/ARG-rich protein 34A |
| 21.8174 |
Ahg938367 | uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|