Detail



ID : Ahg478562

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478562|fgenesh2_kg.3__1263__AT3G12080.1
Sequence
CTCTGCCAAA AATGGCGAGT CTACTTGATT CGTTGACAAC CAGAGGCTTC TTCACCATTC CTTCAATTTC TAGGATTTCT TCTCCTTTAG CTTCTTCATC TTCATTGACT TCTTCACCAT CTTCCTCTTC TTCGATTATC CCATCCTTGT CAGTTCTCTC TTACACTCAC CAACACTCGC ATTCTCGCTT CCCTTTCCTT GTTGCAGCAA CTCTGGATGG TTCCTCTGCT GAAGAAGAGC TAGATTTCGA AGAATTCGAC CAATATGCTG AAGACAACTA CGCTGATGAT TCCGATGACG AAGACGACTC CATCGATATC TCCGTTCTTG AGAAAGAAGC GAGAGATATC GTGAGAGATT ATGCTACCAC TTTGTCTCGC GAGCTCAAAC TCGAGGATGA GACCATTGAG GGGAAGGAAA CTCGTAGAAA AGGGAAAAGG CTAGCCAAAA ATACGCAGCA GATACCAGAG CATCTTCTCC AAAGAGTTGC GATAGTTGGA AGGCCCAATG TTGGCAAATC AGCATTGTTC AACCGTCTTG TTGGGGAGAA TAGAGCTATT GTAGTGGATG AACCTGGAGT TACTAGGGAT CGATTGTACG GTAGATCGTA TTGGGGTGAT CAAGAATTTG TGGTGGTAGA CACAGGAGGT GTTATGACTG TTTCAAAGTC ACCATCTGGT GTCATGGAAG AGCTGAATGT GTCAACCACC ATTGGGATGG AAGGTATTCC ACTAAGCTCT AGGGAAGCAG CTATTGCAAG GATGCCTTCC ATGATTGAGA AACAAGCGAC AGCAGCTGTC GACGAATCAG CTGTTATTAT TTTCGTTGTC GATGGCCAGG CAGGGCCATC AGGTGCTGAT GTGGAAATTG CGGACTGGTT GCGGAAGTAC TACTCACATA AGTATATCAT TCTCGCGGTA AACAAATGTG AATCACCACG TAAAGGACTC ATGCAGGCTT CGGAATTTTG GTCTCTAGGG TTCACACCTA TCCCTATTTC TGCATTGTCG GGAACTGGAA CAGGAGAGCT GCTTGATCTT GTTTGTTCTG GGCTAAATAA ACTCGAGATC ATGGAGAACA TCGAAGAGGA GGAAGAAGAA AACTACATTC CTGCCATTGC AATTATTGGT CGGCCAAATG TTGGCAAAAG TAGCATTTTA AATGCACTTG TCCGAGAGGA TAGAACAATA GTTAGCCCTG TTAGTGGAAC TACCCGTGAT GCTATAGATG CAGAATTTAC CGGACCAGAT GGGGAGAAGT TTCGGCTTAT AGATACAGCC GGGATCAGGA AAAAGTCATC TGTGGCTTCA TCAGGCAGCA CTACAGAGGC CATGTCAGTG AATCGTGCAT TTCGAGCAAT TCGTCGTTCT GATGTTGTTG CCCTTGTCAT TGAAGCCATG GCATGCATAA CAGAGCAGGA TCTGAAGATT GCAGAAAGAA TAGAAAGAGA AGGGAAAGGA TGTCTGGTTG TTGTAAACAA ATGGGATACA ATACCAAACA AAAACCAAGA GACTGCAGCA CATTACGAGG ACGATGTTCG GGAGAAGCTC CGTTCCCTCA AATGGGCACC TATTGTTTAT TCTACTGCAA TAACTGGCCA TAGTGTTGAC AATATTGTGG TTGCTGCTGC GACGGTTCAA AAGGAGAGAT CAAGAAGACT TAGTACAGCC ATATTGAACC AAGTGATAAG AGAAGCAGTT GCATTTAAAT CCCCTCCAAG AACCCGTGGA GGCAAGCGAG GCCGCGTTTA CTATTGCACC CAGGCAGCAA TAAGGCCACC GACGTTTGTT TTCTTTGTAA ACGACGCAAA GCTGTTTTCG GATACGTACA GAAGGTATAT GGAGAAGCAG CTACGCACTG ATGCAGGCTT TGCTGGGACT CCAATTCGGC TTCTTTGGCG CAGTCGTAAA CGATCTGACA AAAATGGAGG AGGTGGAGGA ACAATGAGAA TGGCAGGTCT TACACGCCAG AGAAATCTTG CAACCAAAAG AACATAATAA CGGACGATGT AATTTTTGTT GTATTGAAAA ATAATTACTA TCAAAATATA TATTCA 
Length2056
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4610739.. 4614976
Download Sequence
A.thaliana
AGI-codeAT3G12080.1
DescriptionGTP-binding family protein
TAIR curator summary
Alias[emb2738][embryo defective 2738]
Gene coexpression
MR
MR Locus Description
8.7178 Ahg348440 chloroplast RNA-binding protein 29
9.69536 Ahg944893 Cytosol aminopeptidase family protein
10.9545 Ahg943476 translocon at the outer envelope membrane of chloroplasts 159
13.4164 Ahg474606 chaperonin 60 beta
14.2829 Ahg918907 nuclear encoded CLP protease 5
15.0997 Ahg928005
16.9115 Ahg494320 pentatricopeptide (PPR) repeat-containing protein
18.1108 Ahg482714 RNA-binding (RRM/RBD/RNP motifs) family protein
21 Ahg938089 tetratricopeptide repeat (TPR)-containing protein
26.3818 Ahg492365 31-kDa RNA binding protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression