Detail



ID : Ahg938238

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938238|scaffold_502429.1
Sequence
CGATTAGCAA AGCAAACACT ATGATGAACA CTTCTAATGG AATGATATCG GCACCATCTT CATCGTCTTC ACCGGCGGCG AATCCTCAGT CGCCGGGAAT TAAGACTTAT TTCAAGACGC CTGAAGGGAA GTATAAGCTT CACTACGAGA AAACGCATTC CTCTGGTCTC CTTCACTATG CACATGGCAA AACGGTTACT CAGGTAACTC TAGCTCAGCT TAAGGAAAGA GCTGCTCCTT CTACTCCAAC TGGTACTTCG TCGGGTTACA GTGCTAGTAG CGGGTTTCGC TCAGCAACAG CCAGGTTGCT AGGCACTGGA AATGGTAGCC GTGCGCTTAG TTTTGTTGGA GGTAATGGTG GGGGCAAAAG TGTGAGTACA AGTTCAAGAA TTAGTGGCTC CTTTGCTCCT TCTAATTCTA GCACATCAAT GACAAATACG AATTTTGATG GGAAAGGAAC TTACTTGGTC TTCAATGTGA GTGATGCTAT TTTTATCTGT GACTTGAACT CACAAGACAA GGATCCAGTA AAGTCTATCC ATTTCAGTAA TTCAAACCCT ATGTGTCATG CTTTTGATCC GGATGCTAAG GATGGGCATG ACTTACTTAT TGGGCTGAAT TCTGGGGATG TGTACACAGT ATCACTGAGA CAGCAATTAC AGGACGTCTC TAAGAAGCTA GTTGGTGCAC TGCATTATAA CAAGGACGGT TCTGTGAATA ACAGTCGTTG TACTAGTATT TCTTGGGTGC CTGGAGGTGA TGGAGCATTT GTCGTTGCTC ATGCCGATGG CAATTTGTAC GTGTATGAGA AGAACAAAGA TGGTGCCACT GAGTCAACAT TTCCTGCTAT AAGAGATCCT ACACAATTTT CAGTTGACAA GGCAAAATAT AGCAAGAGTA ATCCTGTTGC GAGATGGCAT ATATGTCAAG GTTCAGTTAA CAGCATTGCA TTCTCAAATG ATGGGGCACA CTTGGCGACT GTTGGAAGAG ATGGCTATCT TCGCATTTTT GACTTCTTAA CCCAGAAGCT AGTATGTGGT GGAAAAAGTT ATTATGGTGC TCTGCTGTGC TGTTCTTGGA GTATGGATGG AAAGTACATT TTGACTGGAG GTGAAGATGA CCTAGTTCAA GTGTGGAGTA TGGATGATCG GAAGGTTGTG GCGTGGGGTG AGGGACATAA TTCGTGGGTA AGCGGAGTAG CGTTTGATTC CTATTGGTCG TCACCAAATT CAGATGGGTC AGGAGAGCAT GTCATGTACC GTTTCGGATC AGTTGGACAG GACACACAGT TACTTCTCTG GGACCTTGAG ATGGACGAGA TCGTAGTTCC ACTTAGGCGA GCTCCAGGTG GGTCTCCAAC TTACAGCACA GGAAGCTCAG CTCACTGGGA CAATGTCATA CCAATGGGAA CTCTTCAACC CGCTCCTTGC AAACGAGATG TTCCAAAGCT CTCACCGATC ATAGCTCACC GAGTTCACAC TGAGCCCCTC TCTGGATTGA TGTTCACACA AGAATCAGTC GTTACGGCTT GCCGAGAAGG CCATATAAAG ATCTGGACAC GGCCCAGCGA ATCAGAAACC CAATCCAACA GCTCAGAAGC AAATCCTACA AGTGCCCTCT TGAGCACAAG CTTCACAAAA GACAACAAAG CCTCACTGAG CAGCAAGATC ATCGGTGGTT CTACTTTCAA GCAATGACGG AGAGATGCTA CTTGTCC 
Length1717
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15654667.. 15658279
Download Sequence
A.thaliana
AGI-codeAT3G53390.1
DescriptionTransducin/WD40 repeat-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.47723 Ahg340533 cationic amino acid transporter 4
5.83095 Ahg941463 E1 C-terminal related 1
6.9282 Ahg477768 DNA-binding storekeeper protein-related transcriptional regulator
7.14143 Ahg922444 D111/G-patch domain-containing protein
12.8452 Ahg478310 D111/G-patch domain-containing protein
19.3907 Ahg942061 RNA recognition motif (RRM)-containing protein
22.2486 Ahg472334 U5 small nuclear ribonucleoprotein helicase, putative
27.1293 Ahg940290 mRNA splicing factor, thioredoxin-like U5 snRNP
34.4674 Ahg313056 Preprotein translocase SecA family protein
37.3095 Ahg491267 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression