Detail



ID : Ahg939568

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|939568|scaffold_600112.1
Sequence
CAGTTTCTTC AAGCTCAGCT ATGGCGGTCT TCAAAACCCT AGCTTTTCTG TTCTTTTTAT GCTTCGTGAT TTACCAAGCA GTGGCTGTTA CAGATGTAAA TTCATCGTTT TCGTTTAATG GGTTTGTGAA ATCTCCAAGC TTTGACAAGA ATGTTGCTCT GTTTGGAGAT TCGAAGCTCG TTAATGGCGG TCCATCGATT CAATTGACTG ACTCAGTGAG TCGAAGTGAA GGGCGAGTTA TTTACAAGAA ACCCATCAGA CTATTCCAAG GTAAAGAGAG AAACTCTTCC GGATCATTCT CAACTAGTTT CTCGTTTTCG ATGTCTGATG AGATTGGTAG TGTCCTGGCT TTTGTAATGG TTCCAAGAGG TTTGGATCTT AGGTTGTTTG GTAGAAAGGG TAATAGTTCC TCTGGTCTAG GGTTCTTATT GAAACACAAG GTTGTTGCTG TTGAGTTTGG TATCTCCAAA AGAGGGAATC GTGTTGGGAT CTTAGTTGGT AGACCTGAAT CTGGTAAAGT TAGAAAGTTA TCATCTTTTG GTGACCATTT CAATGGAGAG AAGAAATTGA ATTGTTGGAT TGATTATGAG GCAAGTTCAA AGAGAATAGA GGTTCGTTTG AGTCTATCTA CGGCTTTAAA GCCGGTGGAT CCATTTGTGT CTTACTTGGT AGACTTGGCT AAGCTATGGA AAGATGGGAA GTTCATGGTG GGTCTAACCT CTGCAAATGG AAACTCTTCA AAGCCAGTTT ATCTCCATTC ATGGAACTTT AAACTGAGAC ATCCTTCGAT GAGGATTCAC TCACAGCCGC TTGATCCAAA CGATGTTTCC AAGACCGCTA AGGAAGGGGA GAAGACGGTG GAAGTTAAGG GGAAAGGAAA ATGCATATGG AGAATCCTTG GTGCATTGGT TTTAGGTGCG GTTTGTGGGA CTTTAGGAGC GATGTCAGCG TTGTACCTTT GGACAATATG CGGTAATCGG CAGTCAATGG CAATAGTTCC TGAGGAATGT GCTAACAAAA AAGCGGATAT CGTTGTAATG AAATCAGATG TTGTTGATGA AGAAGGGAAG AAGTAGCAGA AAGATAAGAG TTTGGTTGT 
Length1099
Protein Sequence
Protein Residue
Map Locationscaffold_6: 421048.. 422144
Download Sequence
A.thaliana
AGI-codeAT5G01090.1
DescriptionConcanavalin A-like lectin family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.19615 Ahg930357 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
9.16515 Ahg472939 squamosa promoter binding protein-like 10
15.6205 Ahg492364 Pectin lyase-like superfamily protein
16.1864 Ahg493003 Tetratricopeptide repeat (TPR)-like superfamily protein
19.2354 Ahg476038 Adenine nucleotide alpha hydrolases-like superfamily protein
22.2036 Ahg484066 O-fucosyltransferase family protein
25.7488 Ahg494823 P-loop containing nucleoside triphosphate hydrolases superfamily protein
32 Ahg490461 Protein of unknown function (DUF3133)
35.5668 Ahg888090 Basic-leucine zipper (bZIP) transcription factor family protein
36.2215 Ahg949608 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression