Detail



ID : Ahg321672

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|321672|fgenesh1_pm.C_scaffold_4001729
Sequence
ATGGATTCTT CTTCCTCTTC TTCTTCTCCT TCTTCTTCTT ACGGTGTTGC TCGTGTCAGC CATATCTCTA ATCCTTGCAT CTTTGGGGAA GTTGGGTCGT CATCTTCGTC AACATATAGA GATAAGAAAT GGAAGTTGAT GAAATGGGTG AGTAAGCTTT TCAAGACTGG CTCTAATGGT GTTAGTGGTG TTCACACTAA TCATCATCCT CAGTTTCAAG AAGACGAGAA TATGGTCTTT CCTCTACCTC CTTCTTCTTT GGATGATCGG TCGAGAGGTG CACGGGACAA AAAAGAGCTC GACCGTTCAA TTTCACTTTC TCTAGCTGAC AACACGAAGC GCCCACATGG GTATGGTTGG TCTATGGATA ACAATCGAGA TTTTCCAAGG CCTTTTCACG GTGGCTTGAA TCCATCATCT TTCATTCCAC CTTATGAGCC TTCCTATCAA TGCAGACGAA GACAAAGCAG AATATGTGGC GGTTGCAATC GCGATATTGG ATCAGGGAAC TATCTAGGAT GCATGGGCAC ATTCTTTCAT CCTGAATGCT TCCGTTGTCA TTCTTGTGGT TATGCTATCA CTGAGCATGA GTTCTCTCTG TCAGGAACCA AACCGTATCA TAAGCTTTGT TTCAAAGAGC TTACTCATCC CAAATGCGAA GTTTGTCACC ATTTTATACC AACTAATGAT GCTGGCTTGA TCGAGTATCG ATGCCATCCG TTTTGGAACC AAAAGTATTG CCCGTCTCAC GAATATGATA AAACCGCTCG TTGTTGCAGC TGCGAACGTT TGGAGTCATG GGATGTGAGA TATTACATGT TAGAAGATGG GAGAAGTTTG TGTTTAGAAT GTATGGAAAC TGCGATAATC GATACTGGAG AGTGTCAACC GCTTTACCAC GCGATAAGAG ACTATTACGA AGGAATGTAC ATGAAACTTG ATCAACAGAT TCCTATGCTT CTTGTTCAAA GAGAAGCTCT CAATGATGCT ATCGTAGGAG AGAAAAACGG ATACCATCAC ATGCCTGAGA CAAGAGGTTT ATGCTTGTCT GAAGAACAGA CAGTTACAAG TGTTCTTAGA AGACCGAGAC TTGGTGCTCA CCGTCTTGTT GGTATGAGAA CTCAGCCTCA AAGGCTTACA CGCAAATGTG AAGTCACAGC CATACTCGTT CTTTACGGAC TCCCACGATT ACTAACCGGA GCAATTCTCG CCCATGAGCT CATGCACGGA TGGTTAAGAC TCAATGGGTT TAGGAACCTT AACCCTGAGG TAGAGGAAGG AATCTGCCAA GTCCTCTCTT ACATGTGGCT TGAATCTGAA GTTCTCTCAG ATCTTTCATC AAGAAACTTG CCTTCAACAT CATCGGCAGC CACACCATCA TCATCATCAT TGTCTAACAA GAAAGGAGGG AAATCAAACG TAGAGAAGAA ACTTGGAGAG TTTTTTAAAC ATCAGATAGC TCATGATGCG TCTCCAGCTT ATGGAGGAGG TTTCAGAGCA GCAAATGCAG CGGCTTGTAA GTACGGTCTA CGTCGCACAC TCGATCATAT CCGCTTAACA GGAACTTTTC CTTTGTGA 
Length1578
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18360401.. 18364496
Download Sequence
A.thaliana
AGI-codeAT2G39830.1
DescriptionDA1-related protein 2
TAIR curator summary
Alias[DAR2][LRD3][DA1-related protein 2][LATERAL ROOT DEVELOPMENT 3]
Gene coexpression
MR
MR Locus Description
16 Ahg900387
20.2485 Ahg478917 phosphoenolpyruvate carboxylase 3
21.7256 Ahg939605 expansin A9
24 Ahg497050 Serinc-domain containing serine and sphingolipid biosynthesis protein
40.4969 Ahg908250 Mannose-6-phosphate isomerase, type I
47.5815 Ahg496280 glucuronidase 1
48.5283 Ahg492401 phosphoglucan, water dikinase
53.507 Ahg495025 Leucine-rich repeat transmembrane protein kinase family protein
58.9915 Ahg480557 ubiquitin-conjugating enzyme 29
62.2575 Ahg478564 tetraspanin6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression