| Annotation |
|---|
| Description | jgi|Araly1|939838|scaffold_600382.1 |
| Sequence |
AAGTTCTGGT TCACCGATTG ATGGGTCGTG GCTCAGTGAC GTCGCTTGCT CCTGGGTTCC GTTTTCACCC AACGGACGAG GAACTTGTTC GCTACTACCT TAAGCGTAAG GTCTGCAACA AACCCTTTAA GTTCGATGCT ATTTCCGTCA CCGACATATA CAAATCCGAG CCTTGGGATC TACCGGATAA GTCTAAGCTG AAAAGTAGAG ATTTGGAATG GTACTTCTTT AGTATGCTGG ATAAGAAATA CAGTAATGGT TCAAAGACGA ATCGTGCGAC GGAGAAAGGG TATTGGAAGA CGACTGGCAA GGATCGGGAG ATTCGTAATG GTTCAAGAGT CGTTGGGATG AAGAAGACAC TTGTTTATCA CAAGGGTCGA GCTCCTCGTG GTGAAAGGAC CAATTGGGTT ATGCACGAGT ATAGGCTTTC TGATGAGGAC TTGAAGAAAG CTGGTGTGCC GCAAGAAGCA TATGTGTTAT GTAGGATATT CCAGAAAAGT GGTACGGGTC CTAAGAATGG GGAGCAGTAC GGTGCTCCGT TTCTTGAGGA GGAGTGGGAA GAAGATGCAA TGACTTATGT ACCAGATCAA GATTCTTTCA GTGAAGGATT GGCTGTTGAT GATGATGTTT ATGTTGATAT TGATGACATT GACGAGAAGC CCGAGAATCT GGTGGTCTAT GATGCCGTTC CAATTCTACC TAACTACTGT CATGGAGAAT CCAGCAACAA TGTTGAATCA GGCAATTACT CAGACTCTGG AAATTACATT CAACCAGGAA ACTACGTTGT CGACTCTGGT GGCTACTTTG AACAACCAAT TGAAACTTTT GAGGAAGATC AGAAGCCTAT CATACGGGAT GGTAGCATTC AGCCTTGTTC TCTGTTTCCA GAGGAACAAA TTGGCTGTGG TGTGCAAGAC GAGAATGCAG TGAATCTGGA ATCTTCCAAC AATAATGTGT TTGTGGCTGA TACATGCTAC AGTGACATTC CTATTGATAC TAACTATTTG CCCGATGAGC CATTTATGGA TCCTAACAAC AATCTTCCAC TCAACGATGG TCTGTACCTG GAAACGAATG ATCTCAGCTG TGCTCAGCAA GATGATTTTA ACTTCGAAGA TTATCTCAAC TTCTTTGATG ATGAGAGTTT CACTCTTGAT GATTCTCAAT TAATGGGACC TGAAGATGCT CTTCCCAACC TAGAAGGCCT TGATCAGAAA CCTACCCCTG AAGAACTGGA GAAGGAGGTC GCAGGAGGCA AAGAGGCGGT GGAGGAAAAG GAAAGTGGCG AAGGATCTTC ATCAAAACAA GATGCAGATG TCAAGGACTT TGATTCAGCT TCGAAGTACC CTTTTCTCAA GAAGACAAGC CACATGCTTG GAGCCATTCC TACTCCATCT TCATTTGCTT CACAGTTCCA AACAAAGGAC GCTGCAATGC GGCTACACGC AGCACAATCT TCTGGTTCAG TTCACGTGAC TGCAGGTATG ATCAGAATAT CAAACTTGAC TCTAGCAGCG GACAGCGGTA TGGGCTGGTC ATATGACAAG AACGGTAACC TCAACGTAGT CCTTTCATTC GGGGTAGTCC AACGGGATGA TGCGCTGAGT GCCTCGGGAA GCAAGACAGA AACTACGGCG ACTAGAGCTA TGTTAGTCTT CATGTGTTTA TGGGTTCTCC TATTCTCTGT TAGCTTCAAA ATAGTAACCA TGGTGTCTGC TCGGTAATAG GACCAAAAGT CGAATCGTCT CAAAAAGACT TTTTGGTGTT TGTACCTCTC CAACTATATA GCCTTTACTT TGGCAGTGCT TTGCTGCTCC ATATTTAAAT TTTTATTTCT AAGGGTTTTG TGTAGTTTGA AATTCTCTTC TAGAAATAAG AACATAACAA CTTTTTTATG |
| Length | 1900 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 1409939.. 1412567 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G04410.1 |
| Description | NAC domain containing protein 2 |
| TAIR curator summary | NAC family member, functions as a transcriptional activator, regulates flavonoid biosynthesis under high light. |
| Alias | [anac078][NAC2][Arabidopsis NAC domain containing protein 78][NAC domain containing protein 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.9282 |
Ahg916985 | |
| 9.79796 |
Ahg494266 | BAX inhibitor 1 |
| 11.0454 |
Ahg475836 | Rubber elongation factor protein (REF) |
| 12.6886 |
Ahg939714 | ATPase, AAA-type, CDC48 protein |
| 27.55 |
Ahg494831 | eukaryotic release factor 1-1 |
| 34.4964 |
Ahg490909 | conserved peptide upstream open reading frame 49 |
| 44.5421 |
Ahg311699 | ENTH/VHS/GAT family protein |
| 48.0833 |
Ahg495379 | spermidine synthase 3 |
| 53.7401 |
Ahg475826 | Major facilitator superfamily protein |
| 58.9915 |
Ahg934965 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|