Detail



ID : Ahg929366

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929366|scaffold_301823.1
Sequence
TGTGAACAAA AAACTCGAAA CAAATGAAGA AAACACCTTC GCCGGAACCA GTCACCATCT ACGGCAATCA GCAAGAAACC TTCGTCGGAG ATATGGAGTA CTACACTTAC TTCGACGAAT CTTGTATCCA TGACATGAAC TATTTCGTCA AAACAATCAC CGGAATCAAA TCCAAAGGAA TCCGACCAGA CCTCATCGGT TCCATCATCG CTCATTACGC TTCAAAATGG CTCCCTGATC TCTCCGGCAA CGTCTCCGCC ATCATTTCCA CCTCCGTAGA ATCCAAGAAC CACCTCAATG ACACACAGCC GGAGAGCGTC ACGGCGTCTG TTATGAAGAA ACGATTTTTC GTCGAAACAC TAATCGGAAT CCTCCCGCCG GAGAAAGACT CTGTTCCTTG CAATTTCCTT CTCCGTCTCC TCAGGGCAGC GAAAATGGTC GGAGCTAATC CGAACTACTT AACGGAGCTT GAAACCAGAG TCTCGTGGCA GCTTGACCAA GCCTCTCTCA AGGAGCTTAT GATACCTTCT TTCAGCTACA CGTCTGGTAC TTTGCTTGAC GTTGAGCTTG TGACACGTCT CGTGAACAAA TTTGCTGGAT TGGATAGTGA AGGTGTTAAA ACCAGTGCGG CTCTTGTTAA AGTGGCCAAG CTTGTTGATT CGTACCTCGC TGAAGCAGCC GTTGACGGTG GTTTGGCTTT ACCGGAGTTT ATATCCTTAA TCACAGCTCT TCCTAGCCAT GCTCGTACTA CAGAGGATGG CTTGTACCGG GCCATTGATA CATATCTCAA GGCACATCCT CAGGTGTTGA AGCAAGAAAG GAAGGAACTT TGCAGGCTTA TTGATAGCAG AAAGCTATCA CCAGAAGCAG CTCTTCACGC GGCTCAGAAT GATCGTTTAC CGGTGAGAGC AATCATTAGA GTTTTGTTCA CTGAGCAGAC AAAGCTAAGT CGTCACATTG ACTGGAATGG TAGCTCTATA AGCAGCACGA CGAAGAGTCC AACAAACCCT TCTGGTTCAC ATTACTTGGA GGGAGGTTCT GCAGCGCGGT GCTTGTCTAA ACGTGAGATG AATGTTCAGC AAGCAGAGAT AAGAAGGCTT CGAGAAGATG TGGTGAGGCT GCAGAGCCAG TGCAGTGCTA TGCATTTGCA GGTGGAGAGG CTTATGGAGA AGAAGAGTAG TGGTGGAAGT AAAGGGTTTT TCCGGTGGAA GAGGCTCGGG TTAGTACCGT CAATTAGAGG AAGTGTTAGC GTTGAAAAAG GTGAGGAAGA ATCTGGTGAT GGTGAAGGAT TTGAGCCTCG GACTCCTGGG AATATGAAGA CAAGGCTTGT CAAAGGAAGA ACGACACCTT CAAGGTGGAG AAAATCTATG TCTTAAATCT TGAATTAATG AAAACA 
Length1396
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6211255.. 6212703
Download Sequence
A.thaliana
AGI-codeAT3G15570.1
DescriptionPhototropic-responsive NPH3 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.245 Ahg939212 Fatty acid/sphingolipid desaturase
6.48074 Ahg940287 serine carboxypeptidase-like 35
10.3923 Ahg905237 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
10.4881 Ahg482567 NDR1/HIN1-like 12
11.7898 Ahg938360 Eukaryotic aspartyl protease family protein
14.0712 Ahg495863 CONSTANS-like 5
14.1421 Ahg488334 Gibberellin-regulated family protein
15.0997 Ahg944923 Low temperature and salt responsive protein family
18.4391 Ahg481805 outer plastid envelope protein 16-1
21.3307 Ahg482064 16:0delta9 desaturase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression