Detail



ID : Ahg940352

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|940352|scaffold_600896.1
Sequence
CTACGGTTGT TGATTTGGAA ATGGACAAGT ATGATGTTGT CAAGGATCTG GGAGCTGGGA ATTTCGGTGT GGCTCGCCTT CTTAGGCACA AGGACACTAA AGAGCTTGTT GCCATGAAAT ACATCGAGAG AGGCCGCAAG ATAGATGAGA ACGTGGCGAG AGAGATCATC AACCACAGAT CACTTAAGCA TCCTAATATC ATCCGGTTCA AGGAGGTGAT TCTGACACCT ACTCATCTTG CTATTGTGAT GGAGTATGCT TCTGGAGGAG AGCTCTTTGA TCGAATCTGT ACTGCCGGTA GATTTAGTGA AGCTGAGGCT AGGTACTTCT TTCAACAGCT GATTTGTGGT GTTGACTACT GCCATTCCTT GCAAATATGT CATAGAGACC TGAAGCTTGA GAACACACTG CTCGATGGGA GCCCTGCTCC GCTTTTGAAA ATCTGTGATT TTGGTTACTC TAAGTCATCT ATACTACATT CTAGGCCTAA ATCGACTGTT GGAACTCCAG CATACATAGC ACCTGAAGTT CTTTCACGGA GAGAATATGA TGGCAAGCAC GCGGATGTGT GGTCATGTGG CGTAACCCTT TATGTGATGC TGGTTGGAGC TTACCCGTTT GAGGACCCTA ATGATCCAAA GAACTTCAGG AAAACAATCC AACGTATAAT GGCTGTACAA TACAAGATCC CGGACTATGT ACACATATCC CAGGAATGCA AACACCTTCT CTCTCGCATA TTCGTCACTA ACTCCGCAAA GAGAATCACG CTTAAGGAGA TCAAGAATCA TCCGTGGTAC TTGAAGAACT TGCCAAAGGA GCTGCTAGAG TCGGCTCAAG CAGCATATTA CAAGAGAGAC ACGAGCTTCT CTCTTCAAAG CGTAGAGGAC ATAATGAAGA TAGTTGGAGA AGCAAGGAAT CCAGCTCCAT CTACTAGTGC TGTCAAAAGC TCGGGCTCAG AAGCTGAGGA AGAAGAGGAA GAGGACGTTG AAGCTGAAGT GGAAGAAGAT GAAGAAGACG AATACGAGAA GCATGTCAAA GAGGCACAGT CTTGTCAAGA GCCTCACAAA GATTAAAAGG CAAAATGCTC TCTAATT 
Length1097
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3439210.. 3441633
Download Sequence
A.thaliana
AGI-codeAT5G08590.1
DescriptionSNF1-related protein kinase 2.1
TAIR curator summaryEncodes a member of SNF1-related protein kinases (SnRK2) whose activity is activated by ionic (salt) and non-ionic (mannitol) osmotic stress. Similar to the calcium/calmodulin-dependent protein kinase subfamily and the SNF1 kinase subfamily.
Alias[ASK2][ASK2][SNRK2-1][SNRK2.1][SRK2G][ARABIDOPSIS SERINE/THREONINE KINASE 2][ARABIDOPSIS SKP1-LIKE1][SNF1-related protein kinase 2.1]
Gene coexpression
MR
MR Locus Description
2 Ahg473199 O-acetyltransferase family protein
3 Ahg483292 nudix hydrolase homolog 23
13.6382 Ahg897921 centrin2
14.0712 Ahg495937 ABC transporter of the mitochondrion 3
14.9666 Ahg950254 calcineurin B-like protein 2
23.2379 Ahg487299 ubiquitin-conjugating enzyme 22
25.4558 Ahg472672 ARG1-like 1
26 Ahg941201 Major facilitator superfamily protein
28.1069 Ahg493113 casein kinase II beta chain 2
30.4959 Ahg473932
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression