Detail



ID : Ahg325028

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|325028|fgenesh1_pm.C_scaffold_6000248
Sequence
ATGAAGCTCG GAGTTTTTGT GTACAGATTA TACAGAGTGT TAACCTACGG TGTCTCCCCG TTAATTAACC TACACATACG GTGGCGCAGA CTCCGGGGAC CAGAGCATTG CCGTCGTTGG CCAGAGCGGT TCGGTCATCC TTCCGCCGTA AGACCGCCGG GTTCACTCGT CTGGTTTCAC GCCGTCTCTT TAGGTGAAGG AATGGCTGCG ATTCCGGTGA TCAGACACTG CAATGAAACG AAGCCAGATT TGACTATCCT TATGACGACG ACGACAGTAT CTGCATTTGA AGTAATAAAG GATCAACTTC CTGTTGGTGT ATTACATCAG TTTGCACCAC TGGATACACC GGTGGCTATC GACAGATTCC TTGGCCATTG GAAACCGAAT GCGATTGTCA TAATGGAGAA TGAACTCTGG CCTAATCTCA TCATGGCTGC TTCGGGACTT CTAATTCCGT TGGCAATGTT GAACGCTCGG ATGTCTACTA AATCCTTTAA ACGGTGGTCT AGTCCGCTCT TACTACCGCT GGTATCGTTG TTGCTATCTA AATTCTCATT GATAGCACCT CTGAGCACCC TGCAGGGTTT ACATTTCCAG CTGCTGCATG CGCCACCCTT TGTCATAAAT TATTCTGGTG ACTTAAAATA CGTGGTAAAC AAGTTCCGTG TATCTAGTGG AACATCTGAA AGTATAAGAG ATCTAAAAGT AGAACTCTCA GAAATGAAAG TCTGGATTGC ATCTTCTTTA CATAGAGGCG AAGAAGAAGT CATTTTAGGA GTTCACAACA TGCTTCTCGA ATCACATCCG GACTCTGTTG TCATAATTGT GCCTCGACAT CCACATCATG GCCAACAGAT TGCTCATAAA CTGCGGAAAG ATGGCCAAAG TGTTGCTCTA AGGTCTCAAA ATGAAAAGCT TACATCAAGG AAGACGAATA TATATGTGGT GGATACACTA GGTGAACTAA GAGAATTGTA CAGTGTAGCT CCAATAGCCG TCATTGGAGG CTCTTTCATC CCAGGATTAA CTGGTCACAA CTTGTCTGAA GCAGCTGCTG CTGGCTGTGC CGTTATTACA GGTTGTCATG TTGGGCATTT CTCTCACATG GTGAAGGCGA TGCAGCAGTC GAATCCCTTA TCGGTGACAC AGGTCTCGAC AAAACTAGAG CTCAAAGAAG CTGTAGACTT GCTCCTGAGT AACCCTGAGA TCTTGGAAAC ACAGCAGAGA GCTTCTAAAG AAGTTTATGA ATCTCTATCA AGCTGCATTA TCACTAACAT CTGGAATCTT CTCAATCTTC ATATCTTTAG AGGGAAATGA 
Length1320
Protein Sequence
Protein Residue
Map Locationscaffold_6: 1121795.. 1124185
Download Sequence
A.thaliana
AGI-codeAT5G03770.1
DescriptionKDO transferase A
TAIR curator summaryEncodes a putative KDO (3-deoxy-D-manno-octulosonate) transferase
Alias[AtKdtA][KDTA][KDO transferase A]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg487349 sequence-specific DNA binding transcription factors
18.2209 Ahg920528 Galactose oxidase/kelch repeat superfamily protein
22.6053 Ahg949231 B-box type zinc finger protein with CCT domain
24.6171 Ahg941307 disease resistance protein (TIR-NBS-LRR class)
25.923 Ahg893389 Alg9-like mannosyltransferase family
46.7333 Ahg487610
57.81 Ahg491066 ACT-like protein tyrosine kinase family protein
60.0999 Ahg917653 type one serine/threonine protein phosphatase 2
61.4085 Ahg476954 DNA-directed RNA polymerase II protein
66.0303 Ahg487743 Vacuolar sorting protein 9 (VPS9) domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression