Detail


ID : Ahg489045

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489045|fgenesh2_kg.6__2179__AT5G21990.1
Sequence
CCGGTCGGTG AATTGAGGAG GTTGAGCGAT AAATTTTCCA ATTTTGATTT CTATATTATT CGAAAGTACT TTCGGGTTGG CTAAACAATT CTCCTTCGAT TTTCCGATTC ACACAAACTC AATCTCGATC CAGATTCCGA GCTTATCCTT CTCCGGCGAA TTTCGATTTG TGTTTTCCGA TCTGATTACA GAGAACCACA TCGAAGCTTC CAGAAAAAAC GATGTTTAAC GGATTAATGG ATCCTGAGAT GATTCGTCTT GCTCAAGATC AGATGAGCCG TATGACTCCT GCTGATTTCG CTAGGATCCA ACAACAGATG ATGTCAAATC CAGATTTGAT GAATATGGCA ACGGAGAGTA TGAAGAACAT GAGGCCTGAA GATTTGAAAC AAGCTGCTGA ACAGCTTAAG CATACACGGC CTGAAGATAT GGCTGAGATT AGCGAGAAGA TGGCGAAAGC TTCCCCTGAA GATATTGCAG CTATGCGTGC TCATGCTGAT GCTCAGTTCA CTTATCAAAT CAATGCAGCT CAGATGCTTA AACAACAGGG AAACGAGCTT CATAGCCGAG GAAATTTCAG TGATGCTGCT GAGAAATATT TGCGTGCGAA GAACAATCTG AAAGACATTC CATCTTCTAA AGGTGGAGCA CTTTTGTTGG CTTGTTCTCT CAATCTAATG TCTTGTTATT TGAAGACGAA TCAGCATGAA GAGTGCGTAA AGGAAGGTTC TGAGGTTTTG GCATCTGATG CAAGGAATGT CAAAGCCCTA TACAGAAGGG GTCAAGCTTA CAGAGATCTA GGCTTGTTTG AAGATGCCGT CTCTGATCTA AGCAAGGCCC ATGAAGTTTC CCCAGAAGAT GAGACAATTG CCGATGTGCT AAGAGATGTT AAGGAAAGAT TGGCTGTCGA GGGGCCTGGC AAGGCATCAA GAGGTGTGGT GATTGAAGAC ATAACTGAAG AAAATAATGT TACTTCCGGA GGGAATAAAA AAACCTCTAA AGAGGTTACT GGGACACAAC GAGAAGGAAA TGTTAATGGT CATGCTCAGG GCGTAAAGAC TGATGTTGAT GGATTGCAGG CTCTCAAAGA TAATCCAGAA GCAATCAGAA CTTTCCAGAA CTTCATTTCA AAAACTGATC CCGATACACT TGCTGCTCTG AGCGGAGGCA AAGCTGGAGA CATGTCACCG GACATGTTCA AAACTGCGTC GAGTATGATA GGCAAAATGT CACCTGAAGA GATTCAAAAA ATGGTTCAAA CAGCCTCTTC GTTTAAAGGA GATAACCCTT TCGCCCCAAC TGCGCCATCT ACAGAAAACG GTTTTACACC CACACCTGAC ATGCTTAAAC TTGCATCTGA TATGATGAGT AAGATGTCAC CAGAAGAGCG TGAGAGGATG TTTAACATGG CATCGTCTTT GAAAGCAAAC GCTCCAGCTT CAACATCATA TGGAAATGCA GAAGCATCTG AACCACGGGA AAGTTTAGGA GCGGGTGGGA GTTCTTCGGG AAATTCCTTT GTGGCTCCAA GAAGCGGTTT CGAACCAAGC ATCCCTTCTG CTCCGCCTGC TGACTTGCAG GAACAGATGA GAAACCAAAT GAAAGATCCA GCGATGCGAC AGATGTTCAC ATCTATGATA AAGAACATGA ACCCAGAGAT GATGGCTAGC ATGAGCGAAC AATTCGGAAT GAAGCTTTCT CAAGAAGATG CTGCAAAAGC TCAGCAAGCC ATGGCTTCTC TTTCTCCCGA CGCCTTGGAG AAAATGATGC GATGGGCGGA TCGGGCTCAA ACCGGGATGG AGAAAGCGAA GAAAGCAAAG AAGTGGTTAC TCGGAAAAGG CGGATTGATC TTTGCTATAT TAATGCTCGT TTTGGCAATG ATCCTTCACC GTCTCGGCTA TATTGGAAAC TAGAGGAAAC AACGGTATCT TAAGGCTTAA TTAATAATAC CTTCGTGAAG ACCAGACCAG TCTTCGGTGG GTTCGTAGTT TGTAAAACTG TAACATCGTT TATCTTCTTT TTCTTTCCTC TAACTCTCGG CTTTTTGTTG GTCCACTTGT GTCTAAATTT CTTCACACTT TCTTCTGTAG TGTTTTAAAA TTAGAAAAAA TACGATTATT TCCTTTTTAG ATATTCGTTA TTTTTATTTT ATAAACATAA TTATTCTTCT
Length2170
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8683610.. 8687177
Download Sequence
A.thaliana
AGI-codeAT5G21990.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias[AtTPR7][OEP61][TPR7][outer envelope protein 61][tetratricopeptide repeat 7]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg473144 plant U-box 17
5.65685 Ahg933013 Ubiquitin-associated/translation elongation factor EF1B protein
7.74597 Ahg490336 exocyst complex component sec15B
10.247 Ahg350459
10.4881 Ahg486708
12.9615 Ahg486817 MIRO-related GTP-ase 2
14.4914 Ahg474191 scarecrow-like 5
16.2481 Ahg946957 casein kinase I
21.7025 Ahg477791 Transducin/WD40 repeat-like superfamily protein
25.2389 Ahg927617 methyl-CPG-binding domain 9
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression