Detail



ID : Ahg942396

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|942396|scaffold_602940.1
Sequence
TTGGTGGATC TAGAAGATAA CAATGTTGGC ATCACATTTC GATTCTTTAG TGTCGAAACT GCCTTCGTTA TCGACATCTG ATCACGCTTC TGTTGTTGCG TTGAATCTCT TTGTTGCACT TCTTTGTGCT TGTATTGTTC TTGGTCATCT TTTGGAGGAG AATCGATGGA TGAACGAATC CATCACCGCC TTATTGATTG GGCTAGGCAC TGGTGTTGCC ATTTTGTTGA TTAGTAAAGG AAAAAGCTCA CATCTTCTCG TCTTTAGTGA AGATCTTTTC TTCATATATC TTTTGCCACC CATTATATTC AATGCAGGGT TTCAAGTTAA AAAGAAGCAG TTTTTCCGCA ATTTCGTGAC TATTATGCTT TTTGGTGCTG TTGGGACTAT TGTTTCTTGC ACAATCATAT CTCTAGGTGT AACACAGTTC TTTAAGAAAT TGGACATTGG GACCTTTGAC TTGGGTGATT ATCTTGCTAT CGGTGCAATA TTTGCCGCAA CAGATTCTGT GTGTACACTG CAGGTTCTGA ATCAAGATGA GACACCTTTG CTTTACAGTC TTGTATTCGG AGAGGGTGTT GTGAATGATG CCACATCAGT TGTTGTCTTC AATGCGATTC AGAGCTTTGA CCTCACTCAC CTAAACCATG AAGCTGCTTT TCATCTTCTT GGAAACTTCT TGTATTTGTT TCTCCTAAGT ACCTTGCTTG GTGCTGCAAC CGGTTTGATA AGTGCGTATG TCATCAAGAA GTTATATTTT GGAAGGCACT CAACAGACCG AGAAGTTGCC CTTATGATGC TTATGGCATA TCTTTCTTAT ATGCTTGCTG AGCTTTTCGA CTTGAGTGGT ATTCTCACTG TGTTTTTCTG TGGTATTGTG ATGTCCCATT ACACATGGCA CAACGTAACG GAGAGCTCAA GAATTACTAC AAAGCATACC TTTGCAACAT TGTCGTTTCT TGCGGAGACA TTTATTTTCT TGTATGTTGG AATGGATGCC TTGGACATTG ACAAGTGGAG ATCCGTGAGT GACACACCGG GAACATCGAT CGCAGTGAGC TCAATCCTAA TGGGTCTGGT CATGCTTGGA AGAGCAGCAT TTGTCTTTCC GTTATCGTTT CTATCTAACC TAGCCAAGAA GAACCAAAGC GAGAAAATCA ACTTTAACAT GCAGGTTGTG ATTTGGTGGT CTGGTCTTAT GAGAGGTGCT GTATCTATGG CTCTTGCATA CAATAAGTTT ACAAGGGCCG GGCAAACAGA TGTACGAGGG AATGCAATCA TGATCACCAG TACGATAACC GTCTGTCTTT TTAGCACAGT GGTGTTTGGT ATGCTGACCA AACCGCTCAT AAGCTACCTA TTGCCGCACC AGAACGCCAC CACGAGCATG TTATCTGATG ACAACACCCC AAAATCCATC CATATCCCTT TGCTAGACCA AGACTCATTC ATTGAGCCTT CAGGGAACCA CAATGTGCCT CGGCCTGATA GTATACGTGG CTTCTTGACA CGGCCCACTC GAACCGTGCA TTACTACTGG AGACAATTTG ATGACTCCTT CATGCGACCC GTCTTTGGAG GTCGTGGCTT TGTCCCTTTC GTCCCTGGTT CTCCAACTGA GAGAAACCCT CCTGATCTCA GTAAGGCCTG AGGAAAATGC GGAAATAAAG CTTTAATTTT TGGTAGAAAA GGGTGATTCA AATTATGCTT TTGTGTAAAT TATCCATTTG TAATATTGTT TGTGAGGACA GAAATTTGTC CCAACGTTTT GAGAGCAGAA AACAAACATG GAAACTTTGA AGGGTTTGAT TGACGTATGT ATATTCATAT TTGTTTT 
Length1837
Protein Sequence
Protein Residue
Map Locationscaffold_6: 12426588.. 12429920
Download Sequence
A.thaliana
AGI-codeAT5G27150.1
DescriptionNa+/H+ exchanger 1
TAIR curator summaryEncodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development.
Alias[AT-NHX1][ATNHX][ATNHX1][NHX1][Na+/H+ exchanger 1]
Gene coexpression
MR
MR Locus Description
6.78233 Ahg476975 related to AP2 4
20.2978 Ahg495173 Clp ATPase
27.4226 Ahg479940 beta-amylase 1
29.189 Ahg479749 alternative oxidase 1A
29.6648 Ahg940647
31.3209 Ahg913087 PLATZ transcription factor family protein
33.2566 Ahg494291 Syntaxin/t-SNARE family protein
38.4968 Ahg478622 A20/AN1-like zinc finger family protein
38.7298 Ahg490837 Homeobox-leucine zipper protein family
42.4264 Ahg487941 serine-rich protein-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression