Detail



ID : Ahg487941

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487941|fgenesh2_kg.6__1075__AT5G11090.1
Sequence
AAAAAAATGG TGACTACTTC GTCACGAACC AAGTCAAACG GACCGGTGCT TCGTTCACAA TCACCGTCGG GTCGATTTTG CGGTGGTTAC TCAAGAGCCG TTCCATCGTC TTCTTCATCA GCTTTCGCTT CATCAACGAG TTCTAGCTTT TCGTCTCCGT CATCAGCTTT TTTCAGCAAT CACCGTCACC ACGAGAACAA CCAGAGTCAT CACCGATCTG CGTCACCGAC TCGTGTGAAT CTCTACACAG CGCAACCGAT GTCTCAGTCG TTTCGATATT CTCTCGATAG CAGATCTATA TCTCCGACTA ACAAATCGAT CTCCGTATCG AAGAATCAGC CACCGAGCCA CCACCACAGT CACAAGATCT CAGAAACGAG AAGGAGATGT ATGTGTTCTC CGACGACGCA TCCAGGATCT TTCAGATGTA GTCTACACAA GAACGTAGCG AATCCACATG GTCAAGGTAC AGCTTCGTAT ACAACGAATG GATTGAATAT GCGTCGATCT GCGATGACTA ATTCGCTGGT GAGAATCGGT GGTGTTGAAG GAGAGTGGGT GAGAAGAGCT TTGACGACTT TGATTCGACC TTCTTCGCAT CATTTGAAAA GACGAGCTGC TTATCAGCCT CGTCCTAGTC GGCTCTCAAT CATGGCCAAA GCTGATGATG GGAATTGATT TGATCTGGAT TTTTGGAATT CAGGTTTGTT TTGTTTGTTG TTCTTCTTCT CTTAAAAGAA ACCACCACAG GATTAGTAGA TCCGGCGATG AAGTCCTTGT TATGAAGCTA GGCGAGATCT GCGAAGAATC GTCGTCGAAA TCGAGATTTT GTAAAACGAA GAAACACACA CCATCATAAT TTTTGTTGTT GTTGGGTGAA GAAGATGCTA GAATGCATTG TACATACTTC TCTTTTTACT GTTTTTGTTG CTCTCTCTAA AAAAAAAAAA TGTTCGGAGT CACACCAAAT TACATCTAAA ATCGAAAATC AAAGAACTGA ATCCAAATTT 
Length1010
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4281344.. 4282380
Download Sequence
A.thaliana
AGI-codeAT5G11090.1
Descriptionserine-rich protein-related
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.083 Ahg479940 beta-amylase 1
19.0788 Ahg495985 zinc finger (CCCH-type) family protein
19.7484 Ahg910579 Myosin family protein with Dil domain
21.3307 Ahg472378 F-box/RNI-like superfamily protein
23.7276 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
26 Ahg472194 RING/U-box superfamily protein
26.3249 Ahg479444 ABRE binding factor 4
34.4964 Ahg925042 trehalose phosphate synthase
35.9444 Ahg950146 Translation initiation factor SUI1 family protein
39.3827 Ahg486886 serine/threonine protein kinase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression