Detail



ID : Ahg490829

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490829|fgenesh2_kg.7__262__AT4G37870.1
Sequence
TTCGCATCAT TTTGTATCAT CCCTGAAAAC CTTAAATGAT CATCTCCTTC GATCATTAAT CTCTTTAATC TTTCTCAATC TTCTTGTTCT TGATCTCTCT TCCTCCGTGA AAAGATGTCG GCCGGTGACG GAAATGCTAC TAACGGTGAC GGAGGATTTA GTTTCCCTAA AGGACCGGTG ATGCCGAAGA TAACGACCGG AGCAGCAAAG AGAGGTAACG GAATCTGCCA CGACGATAGT GGTCCGACGG TGAATGCCAC AACCATCGAT GAGCTTCATT CGTTACAGAA GAAACGTTCT GCTCCTACCA CACCGATCAA CCAAGGCGCC GCCGCTGCTT TCGCCGCCGT CTCCGAGGAG GAGCGTCAGA AGATTCAGCT TCAATCTATC AGTGCATCGT TAGCTTCGTT AACGAGAGAC TCAGGACCAA AGGTGGTGAG AGGAGATCCG GCGGAGAAGA AGACCGATGG TTCAACTACT CCGGCGTACG CACACGGCCA ACATCATTCT ATCTTTTCTC CGGCTACTGG TGCCGTCAGT GATAGCTCCT TGAAGTTTAC ACACGTCCTC TACAATCTTT CCCCTGCAGA GCTTTACGAG CAAGCTATTA AGTATGAGAA AGGTTCGTTT ATCACTTCTA ATGGAGCTTT GGCGACGCTT TCTGGTGCTA AGACTGGTCG TGCTCCGAGA GATAAGCGTG TTGTTAGAGA TGCGACTACT GAGGATGAGC TTTGGTGGGG GAAGGGTTCA CCGAATATCG AAATGGATGA ACATACTTTC ATGGTGAACA GAGAAAGAGC TGTTGATTAC TTGAATTCCT TGGATAAGGT CTTTGTCAAT GATCAATACT TAAACTGGGA TCCAGAGAAC AGAATCAAAG TCAGGATTGT TTCAGCTAGA GCTTACCATT CACTGTTTAT GCACAACATG TGTATCCGAC CAACTCAGGA GGAGCTTGAG AGCTTTGGTA CTCCGGATTT CACTATATAC AATGCTGGAC AGTTTCCGTG TAACCGTTAC ACTCATTACA TGACGTCGTC CACTAGCGTA GATCTTAATC TGGCTAGAAG GGAAATGGTT ATACTTGGTA CTCAGTATGC GGGGGAAATG AAGAAAGGTC TTTTCAGTGT GATGCATTAC CTTATGCCTA AGCGCCGGAT TCTCTCCCTT CATTCTGGAT GCAATATGGG GAAAGATGGA GATGTTGCTC TCTTCTTTGG ACTTTCAGGT ATTGTAGTCG GGAAGACAAC ACTGTCTACT GATCACAATA GGTATCTTAT TGGAGATGAT GAGCATTGTT GGACTGAGAC TGGTGTTTCG AACATTGAGG GTGGATGCTA TGCTAAGTGC GTTGATCTTT CGAGGGAGAA GGAGCCTGAT ATCTGGAACG CCATCAAGTT TGGAACAGTT TTGGAAAATG TTGTGTTTGA TGAGCACACC AGAGAAGTGG ATTACTCTGA TAAATCCGTT ACAGAGAACA CACGTGCTGC GTACCCGATT GAGTTCATTC CAAATGCGAA AATACCGTGT GTTGGTCCAC ACCCGAAAAA TGTGATACTT CTGGCTTGTG ATGCGTTTGG TGTTCTCCCA CCTGTGAGCA AGCTGAATCT GGCACAAACC ATGTACCACT TCATAAGTGG TTACACTGCT CTGGTCGCTG GCACAGAGGA TGGCATCAAG GAGCCAACAG CAACATTCTC AGCTTGCTTT GGTGCAGCTT TCATAATGTT GCATCCCACA AAGTATGCAG CTATGTTAGC TGAGAAGATG AAGACACAAG GTGCTACTGG TTGGCTCGTG AACACTGGTT GGTCCGGTGG CAGTTATGGT GTTGGAAACA GAATCAAGCT GGCATACACT AGAAAGATCA TCGATGCGAT CCATTCAGGC AGTCTGTTGA AGGCGACCTA CAAGAAAACC GAAATCTTTG GATTTGAAAT CCCAACTGAG ATTGAAGGGA TACCTTCAGA GATCTTGGAC CCCATCAACT CCTGGTCTGA TAAGAAGGCA CACAAGGAAA CTCTGGTGAA ACTGGGAGGT CTGTTCAAGA AGAATTTCGA GGTTTTTGCT AACCATAAGA TTGGTGTGGA TGGAAAGCTT ACGGAGGAGA TTCTCGCTGC TGGTCCTATC TTTTAGAAAA CCCAAACAAT GATGGATGAT GTTGTCGAAA AGAAAAGATC TATTATTTAT TAAGAAGAAT AAAATGAGAC TTATCTCTCT GGAGAATGGA GAGAACTTGA TGTTCCAAAT GTGGTGATAT GTAATTTGTC ATTTATTTTT GTTGGGCTTT TGCCAGCATT TACATGATAG AACCAAGTAC GAATAATATG AATTCCGGTC CAATTTAATG ATGGTTTTC 
Length2359
Protein Sequence
Protein Residue
Map Locationscaffold_7: 986381.. 990243
Download Sequence
A.thaliana
AGI-codeAT4G37870.1
Descriptionphosphoenolpyruvate carboxykinase 1
TAIR curator summaryEncodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).
Alias[PCK1][PEPCK][phosphoenolpyruvate carboxykinase 1][PHOSPHOENOLPYRUVATE CARBOXYKINASE]
Gene coexpression
MR
MR Locus Description
2 Ahg919881 Pyruvate phosphate dikinase, PEP/pyruvate binding domain
5.47723 Ahg942557 isoamylase 3
5.65685 Ahg481034 cold, circadian rhythm, and rna binding 2
6 Ahg475728 homolog of anti-oxidant 1
8.42615 Ahg477795 alpha/beta-Hydrolases superfamily protein
10.198 Ahg489182 DNAJ heat shock N-terminal domain-containing protein
10.247 Ahg489476 catalytics;carbohydrate kinases;phosphoglucan, water dikinases
13.5277 Ahg475199 Protein of unknown function (DUF707)
14.3527 Ahg923873 Class I glutamine amidotransferase-like superfamily protein
14.6969 Ahg473550 P-loop containing nucleoside triphosphate hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression