Detail



ID : Ahg942682

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|942682|scaffold_603226.1
Sequence
ACCGCTAGCC AAGCATTGTT ATGGTTCCCA AAGCTGGTGA CTCTACACCA GAAGAGTTGG CTAATGCTAC CCAAGTTCAA GGAGACTACT TGCCTATTGT ACGTGAGAAG CCAATCATGG AGCTCGTCAA GCTGACTTCA GAAATGAAGT CCTTCAAGGC GTATGATAAG ATACGTCTTG AGCGCACGAA CAAGAGACAT GCTGGTGCTA GAGCCAAGAG AGCCTCTGAG GCTGAGAAAG AAGAGAAGAA GTGAGGTCCT TCTTCAGAGG TAGA 
Length274
Protein Sequence
Protein Residue
Map Locationscaffold_6: 18069725.. 18073396
Download Sequence
A.thaliana
AGI-codeAT3G49010.1
Descriptionbreast basic conserved 1
TAIR curator summaryEncodes 60S ribosomal protein L13. Homolog of human breast basic conserved 1 (BBC1).
Alias[ATBBC1][BBC1][RSU2][breast basic conserved 1][40S RIBOSOMAL PROTEIN]
Gene coexpression
MR
MR Locus Description
20.7123 Ahg946318 ribosomal protein L16B
22.3607 Ahg932745 other RNA
31.6228 Ahg470235 Ribosomal protein L19e family protein
40.694 Ahg939059 Zinc-binding ribosomal protein family protein
42.6146 Ahg489610 NOP56-like pre RNA processing ribonucleoprotein
50.9117 Ahg929421 Zinc-binding ribosomal protein family protein
52.2207 Ahg325929 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
60.4649 Ahg495335 RNA binding Plectin/S10 domain-containing protein
65.9848 Ahg942855 Ribosomal protein L6 family
69.455 Ahg474037 nucleolin like 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression