Detail



ID : Ahg943210

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|943210|scaffold_603754.1
Sequence
AGCAGCAAAA GTGACAAATC ATGGCAACAC TTCAAGACAT TGGTGTATCA GCAGGGATAA ACATCCTCAC TGCATTCATT TTCTTCATTA TCTTTGCTTT TTTAAGACTT CAGCCATTCA ACGACAGAGT TTACTTCTCG AAATGGTACC TCAAGGGGTT AAGAAGCAGC CCTGCAAGTG GCGGTGGATT CGCGGGGCGG TTTGTGAATT TGGACTTGAG ATCATACCTC AAGTTCTTGC ATTGGATGCC TGAAGCTCTC AAGATGCCTG AGCGTGAGCT TATTGATCAT GCTGGTTTAG ACTCTGTTGT CTATCTCCGG ATTTACTGGC TCGGGCTTAA GATTTTTGCT CCAATAGCAA TGCTTGCTTG GGCAGTTCTT GTACCGGTTA ATTGGACGAA CAACGAGTTG GAGTTGGCTA AGCATTTAAA GAATGTTACT TCAAGTGATA TCGACAAGCT AACAATTTCA AATATCCCAG AGTCTTCACA TAGGTTTTGG GCTCACATTG TAATGGCTTA CGCCTTCACA ATCTGGACTT GTTATATGTT GATGAAGGAG TATGAGACAG TTGCTAATAT GAGGCTTCAG TTTGTTGCCT CAGAAGCCCG TCGACCTGAC CAGTTTACTG TTCTTGTTAG GAATGTACCT CCGGACCCCG ACGAAACTGT GAGTGAGCTT GTGGAGCATT TTTTCCTAGT CAATCACCCT GATAACTACC TCACACATCA GGTTGTATAC AACGCAAACA AGCTCGCCGA TTTGGTTAGT AAAAAGAAGA AGCTGCAGAA TTGGCTTGAC TACTATCAGC TCAAATACAC TAGAAATAAC TCTCAGACCA GACCTATTAC GAAGCTTGGT TGCCTTGGCT TGTGTGGACA AAAAGTTGAC GCAATCGAAC ATTACATTGC TGAAGTTGAT AAAACATCAA AAGAGATTGC TGAAGAGAGG GAGAATGTGG TGAATGATCA AAAGTCAATC ATGCCAGCGT CTTTTGTCTC CTTCAAAAAC CGTTGGGCTG CTGCTGTTTG CGCTCAGACC ACACAGACCC GAAACCCAAC CGAATGGCTA ACCGAATGGG CTGCAGAGCC GCGTGATGTG TATTGGCCAA ACCTTGCGAT TCCATATGTT TCTTTGACTG TAAGAAATTT GGTTATGAAT GTAGCCTTCT TCTTCCTTAC CTTCTTTTTC ATCATCCCTA TCGCGTTTGT ACAATCTCTT GCTACCGTTG AGGGAATTGA GAAAGTTGCG CCGTTCTTGA AAGTCATTAT CGAAGATAAA TTTGTAAAAT CGCTGATACA AGGTCTGCTA GCCGGTATTG TGCTGAAGCT TTTCCTCATC TTTCTGCCAG GCATACTGAT GACCATGTCC AAATTTGAAG GCTTTACTTC AGTTTCATCC TTAGAAAGAC GATCCGCGTC TAGATATTAC ATCTTTAACT TAGTGAACGT CTTTCTTGGA AATGTTATCG CTGGAGCTGC GTTTGAGCAG CTTAACTCTT TCCTCAATCA GTCGCCTAAT CAAATCCCTA AGACAATTGG CATGGCGATA CCGATGAAAG CAACCTTCTT TATCACATAT ATAATGGTTG ATGGTTGGGC AGGAGTTGCA GGAGAGATTC TTATGTTAAA ACCTCTCATT ATATACCACC TCAAAAACGC ACTCTTGGTG AAAACAGAGA AAGACAGAGA GGAAGCAATG AACCCGGGAA GCATCGGTTT CAACACTGGA GAGCCTCAGA TACAGCTTTA CTTCCTTCTC GGTCTTGTCT ATGCTCCCGT GACACCAATG CTTCTTCCTT TTATCTTAAT CTTCTTTGCG CTTGCTTACG TCGTATATCG CCATCAGATC ATAAATGTGT ATAATCAAGA GTATGAGAGC GCTGCTGCGT TTTGGCCAGA TGTTCATGGA CGGGTTATAA CGGCATTGAT CATATCTCAG TTGCTTCTGA TGGGTTTGAT AGGTACAAAA CATGCCGCTT TAGCTGCACC GTTTCTCATC GCTCTTCCCG TGATTACCAT CAGTTTCCAC CGCTTCTGTA AAGGCCGTTA TGAACCCGCC TTTATCCGAT ACCCCTTACA GGAAGCTATG ATGAAAGATA CATTGGAAAG AGCAAGAGAG CCTAATCTGA ACCTGAAAGG TTACTTGCAA GACGCTTATA TTCATCCTGT TTTCAAAGGC GGTGATGACG ACGACGGTGA CATGATTGGA AAATTGGAGA ATGAAGTCAT CATAGTGCCA ACAAAACGCC AATCGCGGAG GAACACTCCC GCGCCAAGCC GAATCAGCGG TGAATCGTCT CCATCTTTGG CCGTTATTAA CGGTAAAGAA GTCTAGTTTA ACTGTTTCAG TAAAAGCAT 
Length2359
Protein Sequence
Protein Residue
Map Locationscaffold_6: 21025285.. 21028796
Download Sequence
A.thaliana
AGI-codeAT4G04340.2
DescriptionERD (early-responsive to dehydration stress) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.6771 Ahg484960 phototropin 1
16.4924 Ahg915184 photosystem I subunit l
23.1948 Ahg475174 photosystem I light harvesting complex gene 3
27.1109 Ahg483848 photosystem I P subunit
30.133 Ahg485905 photosystem I light harvesting complex gene 1
30.3974 Ahg477073 photosystem II subunit R
37.4166 Ahg489877 light harvesting complex of photosystem II 5
37.7492 Ahg492673 Peroxidase superfamily protein
40.2119 Ahg486624 photosystem I light harvesting complex gene 2
49.0714 Ahg951584 PS II oxygen-evolving complex 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression