Detail



ID : Ahg486624

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486624|fgenesh2_kg.5__2616__AT3G61470.1
Sequence
CTTTTATAGA TTACACATCA TTCCTTCGTT CTTCTTCTAA CACACTTTGA GTCTTGAAGG TCAACAACGT CGAGAAAAAT GGCATCATCT CTTTGTGCTT CTTCTGCCAT CGCTGCCATT TCTTCTCCAA GTTTCTTGGG TGGGAAGAAA CTGAGGCTGA AGAAGAAGTT GACTGTTCCA GCTGTGTCCA GGCCAGATGC GTCGGTGCGC GCCGTCGCAG CTGATCCAGA TAGACCGATC TGGTTCCCGG GAAGCACTCC TCCAGAGTGG CTCGACGGTA GCCTCCCCGG TGACTTCGGA TTTGATCCCC TTGGTCTTTC ATCGGACCCG GACAGTCTAA AATGGAACGT ACAAGCAGAG CTAGTCCACT GCCGGTGGGC GATGCTAGGA GCCGCCGGGA TATTCATCCC GGAGTTCCTA ACGAAGATTG GAATCCTCAA CACTCCATCG TGGTACACGG CGGGAGAGCA AGAGTATTTC ACGGACAAAA CCACACTCTT CGTCGTTGAG CTCATCTTGA TCGGATGGGC CGAAGGACGT AGATGGGCCG ATATCATCAA GCCCGGTAGC GTCAACACTG ACCCAGTCTT CCCAAACAAC AAACTGACGG GCACAGACGT TGGTTACCCG GGTGGGTTAT GGTTCGACCC GTTGGGTTGG GGATCCGGTA GCCCGGCTAA GCTCAAGGAG TTGAGGACCA AGGAGATCAA GAACGGAAGG TTGGCTATGT TGGCAGTGAT GGGTGCTTGG TTCCAACACA TCTACACTGG CACTGGTCCT ATTGATAACC TTTTTGCACA TCTTGCTGAT CCTGGTCACG CCACAATCTT CGCTGCTTTC ACACCCAAGT GAGACGAGAA AAAAGGGTTA TGGGGAGGAG GAGAATGCGT TTGTGTGATC ATGTTTGTAC AAATATCGTT TTGAACTTAA AAATATTTAT GTATTTATAT AAATTGTGGT CGAATGCAAA TTAGGATTCA CCTTAACACT CTCTTTTCCT AACTCAATGA TCATAAGAT 
Length1019
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19167894.. 19169433
Download Sequence
A.thaliana
AGI-codeAT3G61470.1
Descriptionphotosystem I light harvesting complex gene 2
TAIR curator summaryEncodes a component of the light harvesting antenna complex of photosystem I.
Alias[LHCA2][photosystem I light harvesting complex gene 2]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg486922 light harvesting complex photosystem II
2.82843 Ahg470899 photosystem I subunit O
4 Ahg915184 photosystem I subunit l
5.47723 Ahg485905 photosystem I light harvesting complex gene 1
5.74456 Ahg470689 photosystem II subunit P-1
6 Ahg922093 photosystem I subunit K
6.48074 Ahg490167 photosystem II subunit Q-2
7.34847 Ahg489877 light harvesting complex of photosystem II 5
7.48331 Ahg471781 light harvesting complex photosystem II subunit 6
8.30662 Ahg477073 photosystem II subunit R
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression