Detail



ID : Ahg941391

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|941391|scaffold_601935.1
Sequence
GCTTTTCTCC TCCTGTTCTC ATGGAAGCTT CACCCAATGA TCGACTTCAT TTTGGCAAAA TGGGTTTCGG GTGTAAGCAT TACAAGAGGA GATGCCAAAT CAGAGCTCCA TGTTGCAACG AAGTCTTCGA TTGTCGCCAT TGTCACAACG AGAGCACTAG CACATTGCGC AATATCTACG ACCGTCACGA TCTTGTTCGT CAAGACGTTA AACAAGTGAT TTGTTCTGTT TGCGATACAG AGCAGCCGGT AGCTCAAGTT TGTTCGAATT GTGGTGTCAA CATGGGAGAA TATTTTTGCA ACATCTGCAA ATTCTATGAT GATGATACTG AAAAACAACA GTTCCATTGC GATGAGTGTG GAATTTGCAG AGTTGGTGGG CGTGAGAATT TCTTCCATTG CAAGAAGTGT GGATCTTGTT ATGCGGTTGG TCTGCGCAAC AACCATCGCT GCGTTGAGAA TTCAATGCGT CATCACTGTC CCATTTGTTA CGAGTACCTT TTTGACTCTC TAAAGGACAC AAATGTGATG AAATGCGGAC ACACAATGCA CTTAGAATGC TACAACGAGA TGATCAAACG TGACAAGTTT TGTTGTCCGA TTTGCTCGAG GTCAGTGATT GATATGTCTA AAACATGGCA GAGACTGGAT GAAGAGATCG AAGCCACTGC TATGCCTTCA GATTACCGCG ACAAGAAGGT TTGGATACTA TGCAACGATT GTAACGACAC AACAGAAGTG TACTTCCACA TAATAGGACA GAAATGTGGA CATTGCAGAT CTTACAACAC ACGAGCCATC GCGCCTCCTG TTCTTCCTCA ATGACAAAAC CAAGATCTTC CCCATGTATT GCCTCCAAAA AGCTAACAAA AGCTTTTTGT TGCAAAAAAA CTGAGGCAAA AAGATTGATG ATCATAACAA AGAAAAAAAA AGAAAAAGAT TGATAATCAA TTTGATCATT GGTCACAAAA ACAAAACACA CATTTGTCTT CTTCATTTGA TTTGTTGTTG TTCTTATACT GTTATATTTT ACCATTTGTG TTTGGGTGTT GGCAAGCGAG GATTATGTAT AATATAGTCC TCTATATATT CTTGACCCAG GAAAAGTTAC CTGGATGATA TGTTTTCAGG GATTTTTTGA AA 
Length1142
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7424548.. 7427034
Download Sequence
A.thaliana
AGI-codeAT5G18650.1
DescriptionCHY-type/CTCHY-type/RING-type Zinc finger protein
TAIR curator summary
Alias[MIEL1][MYB30-Interacting E3 Ligase 1]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg926342 trehalose-6-phosphatase synthase S8
3.74166 Ahg479525 ubiquitin-conjugating enzyme19
3.74166 Ahg941394 beta-amylase 3
4 Ahg496108 DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II
5.09902 Ahg913433 calcium-dependent protein kinase 2
6.7082 Ahg926133 B-box type zinc finger protein with CCT domain
7.48331 Ahg496533 nuclear factor Y, subunit C4
7.74597 Ahg472014 Major facilitator superfamily protein
8.77496 Ahg489028 5'-AMP-activated protein kinase beta-2 subunit protein
10.3923 Ahg476620 Homeodomain-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression