Detail



ID : Ahg917507

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|917507|Al_scaffold_0008_2258
Sequence
ATGTCGATAA CTTACTCCGC TATTTCCTCT GGTACAGTTT CACCTAAAAG TGTACCTTTT GCTATTCGTA GCGTAACCAG GAGGCAATTT CTTAATCCCA ACCCGTTTTC TAGATTCGGG TTCTCTCCTT CTCTTCAGGG AAGTAGCATT GAGTTTAGAG TTGTGATTAG TAAAGAGCGT CGATCTCTTC CATTGGTTGT GAGAAGTGAT CGTCCTCAGA ATGAAGACTT ACCTAAGCAG TACACAAGGC GAGAGAAGAA ACCTTTTCCG GTGCCAATTG TGGACCTGAG ACGAGCTGCG AGGGAGAGAG TCAAGAACAA CAAAGACAAA CCTAAGAGGC CTCTACCTCC GCCTAAAAAT GGTATGGTTG TGAAGAGCCT TGTGCCTCTT GCTTATAAAG TGTACAATGC AAGAATCAGA TTGATCAACA ATCTCCACCG CCTCATGAAA GTTGTTCGTG TTAATGCTTG TGGGTGGTGC AATGAGATTC ATGTTGGACC TTACGGGCAT CCATTTAAGT CGTGTAAAGG TCCCAATGCT TCCCAAAGGA AAGGTCTTCA TGAATGGACA AACTCAGTTA TTGAGGACGT TATTGTTCCT CTTGAAGCCT ATCACCTCTA TGACCGTCTT GGCAAGCGTA TCCGTCACGA TGAGAGATTC TCGATTCCAC GAGTTCCTGC TGTAGTTGAG CTCTGCATTC AGGGCGGCGT TGAAATCCCT GAATTTCCAA CAAAAAGGAG AAGAAAACCA ATTATCCGCA TTGGCAAAAG CGAGTTTGTT GATGCAGATG AAACTGAATT GCCTGATCCA GAGCCTCAGC CTCCTCCAGT GCCATTGTTA ACTGAGTTAC CTGTCTCTGA GATCACTCCT CCATCTAGCG AAGAAGAAAC GGTCTCCCTA GCCGAAGAAA CATTACAGGC CTGGGAAGAA ATGAGAGCAG GAGCCAAAAA GCTGATGAGG ATGTACAGGG TTAGGGTTTG TGGGTACTGT CCCGAGGTTC ACGTAGGTCC AACGGGGCAC AAGGCCCAGA ACTGTGGTGC ATTCAAACAC CAACAGCGGA ATGGCCAGCA TGGTTGGCAA TCTGCAGTCC TTGACGACTT GATACCACCA AGATATGTTT GGCATGTTCC TGATGTGAAT GGGCCGCCGT TGCAGCGAGA GCTACGAAGC TTCTACGGGC AAGCACCTGC TGTGGTGGAG ATATGCGCTC AGGCTGGTGC CGTTGTACCT GAGCAGTATA GAGCTACAAT GAGACTGGAG GTTGGAATTC CTTCGAGTGT GAAAGAAGCT GAGATGGTCG TTTGA 
Length1305
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17250459.. 17252109
Download Sequence
A.thaliana
AGI-codeAT5G57930.2
DescriptionArabidopsis thaliana protein of unknown function (DUF794)
TAIR curator summaryACCUMULATION OF PHOTOSYSTEM ONE 2
Alias[APO2][emb1629][ACCUMULATION OF PHOTOSYSTEM ONE 2][embryo defective 1629]
Gene coexpression
MR
MR Locus Description
3 Ahg322384 Prolyl oligopeptidase family protein
3.4641 Ahg495434 NAD(P)-linked oxidoreductase superfamily protein
10.0995 Ahg492293 Double Clp-N motif protein
14.1421 Ahg479250 tetratricopeptide repeat (TPR)-containing protein
15.6525 Ahg493502 transferases, transferring glycosyl groups
16.9706 Ahg944247 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
18.9737 Ahg496108 DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II
22.8473 Ahg485109 P-loop containing nucleoside triphosphate hydrolases superfamily protein
23.7487 Ahg932895 Tetratricopeptide repeat (TPR)-like superfamily protein
29.1204 Ahg491552 proton gradient regulation 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression