| Annotation |
|---|
| Description | jgi|Araly1|944295|scaffold_700524.1 |
| Sequence |
CTCGACTTGT ATCATCATCC ATGGCTTCCG AGAATCCTTT CCGAAGCATA TTGAAGGCGT TAGAGAAGCC TGATGGTGGC GATTTCGGTA ACTACTACAG CTTGCCTGCT TTGAACGATC CCAGGATCGG TGAGTTTATA AACTACCTTA TTCCATTAGG ATACTTCTTG AATCGGCCAT ACGTAACTGT GATGAGTTTC AAGTTAAGAG CAAAGATGTT GAGAAGATTC TTGATTGGGA GAATACTTAG AAATTCCGTT CAAACCTGCT CGGGTTCTTC TTCAGGTACC GACTTTACTG GTGTCCCTGC TGTTGTTGAT CTTGCTTGCA TGAGAGATGC CATGAATAAT CTCGGTGGGG ATTCTAATAA GATTAACCCG CTGGTCCCTG TAGATCTTGT CATTGATCAC TCCGTTCAGG TTGATGTGGC GAGATCAGAG AACGCAGTGC AGGCAAACAT GGAGCTTGAG TTCCAGCGCA ACAAGGAAAG ATTTGCTTTT CTTAAGTGGG GATCCAATGC CTTTCACAAC ATGCTTGTCG TACCTCCTGG ATCTGGAATA GTTCATCAAG TCAACCTAGA ATACCTTGCC AGAGTTGTTT TCAACACAAA TGGACTTCTT TACCCAGACA GTGTTGTTGG CACAGACTCT CACACCACTA TGATTGATGG ACTGGGTGTT GCTGGATGGG GAGTTGGCGG TATAGAAGCG GAAGCTACCA TGCTTGGTCA GCCAATGAGC ATGGTCCTGC CCGGTGTTGT GGGTTTCAAG CTAACAGGAA AACTAAGAGA TGGAATGACA GCTACTGATT TGGTCTTAAC AGTGACTCAA ATGCTGAGGA AACATGGAGT AGTTGGAAAG TTTGTTGAAT TCCACGGGGA AGGGATGAGA GAATTGTCTT TAGCTGATCG TGCTACAATT GCCAATATGT CTCCTGAGTA CGGTGCAACC ATGGGATTCT TCCCAGTTGA CCATGTCACG TTGCAGTATC TAAGGTTGAC AGGCAGGAGC GATGACACTA TCTCTATGAT AGAGGCGTAT TTACGAGCAA ACAAGATGTT TGTGGATTAC AGTGAGCCAG AGAGTAAGAC AGTTTATTCC TCATGTCTGG AATTGAATCT GGAGGATGTG GAACCTTGTG TTTCTGGTCC CAAGAGGCAG ACTGACATTC GTGCTTGGAT AATAGAGTGG GATTCAAGGT TAGATTTTGC TGTACCTAAA GAAGCACAGA GTAAGGCTGT AGAGTTCAAT TTTAACGGGA CCACAGCACA GCTTAGACAT GGAGATGTTG TTATAGCAGC AATCACCAGT TGCACAAATA CCTCGAACCC TAGTGTAATG CTTGGCGCTG CCTTGGTTGC AAAAAAGGCC TGCGAACTAG GACTGGAGGT TAAGCCATGG ATTAAAACTA GTCTTGCTCC AGGCTCTGGA GTTGTAACAA AGTACTTGGC AAAGAGTGGC TTGCAGAAGT ACTTGAATCA GCTCGGCTTC AGTATAGTTG GTTATGGGTG TACCACATGC ATTGGAAACT CAGGGGATAT CCATGAAGCT GTGGCTTCAG CAATAGTTGA TAATGACTTG GTGGCATCCG CTGTGTTGTC CGGGAACAGA AATTTTGAGG GACGTGTTCA CCCGTTAACA AGGGCTAACT ATCTAGCTTC CCCGCCGCTT GTTGTAGCCT ATGCTTTGGC TGGAACGGTT GACATTGATT TTGAGACACA GCCCATTGGA ACTGGGAAAG ATGGCAAACA GATATTTTTC AGGGACATCT GGCCCTCTAA CAAAGAAGTT GCTGAGGTAA ATATATATGG GTTGTTCAAT CTAGTGTCCT TCCTGATATG TTCAAAGCTA CATATGAAGC AATCACCAAA GGAAATTCCA TTGGGACCCG AAATTGAGTG GGACCCGAAA TCAACATACA TTCACGAGCC ACCTTATTTC AAGGGCATGA CCATGTCACC ACCCGGTCCA CATGGTGTGA AAGACGCATA CTGTTTACTC AATTTTGGAG ACAGTATTAC CACTGATCAC ATCTCACCAG CTGGTAGCAT CCACAAGGAC AGTCCGGCGG CTAAGTACTT GATGGAACGA GGTGTGGACA GAAGAGACTT CAACTCTTAC GGGAGTCGCC GTGGTAATGA TGAGATTATG GCAAGAGGCA CTTTTGCAAA TATCCGTATT GTCAACAAAC ACTTGAAAGG AGAAGTTGGT CCCAAAACAG TTCACATTCC CACAGGAGAG AAGCTTTCTG TCTTTGATGC TGCCATGAAA TACAGGAACG AGGGACGCGA CACAATCATT TTGGCTGGTG CTGAATACGG TAGTGGAAGT TCTCGTGATT GGGCTGCCAA GGGTCCAATG CTTCTGGGTG TGAAAGCTGT GATTTCAAAG AGCTTCGAGC GAATTCACCG AAATGCTGAG ACACTAGGCC TAACGGGTCA GGAGCTTTAC ACCATTGATC TCCCAAACAC TGTTAGTAAG ATCAAACCAG GACAAGATGT AACAGTCATC ACAAACAATG GGAAATCTTT CACATGTACA CTCCGATTCG ACACAGAGGT GGAGTTGGCT TATTTTGATC ACGGAGGTAT ATTGCAGTAC GTTATCAGGA ACTTGATCAA ACAATAAATC TGGTAAGCCA CCAGAGACTT |
| Length | 2650 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 2023503.. 2028581 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G35830.1 |
| Description | aconitase 1 |
| TAIR curator summary | Encodes an aconitase that can catalyze the conversion of citrate to isocitrate through a cis-aconitate intermediate, indicating that it may participate in the TCA cycle and other primary metabolic pathways. The protein is believed to accumulate in the mitochondria and the cytosol. It affects CSD2 (At2g28190 - a superoxide dismutase) transcript levels and may play a role in the response to oxidative stress. This enzyme can also specifically bind to the 5' UTR of CSD2 in vitro. |
| Alias | [ACO1][aconitase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.24621 |
Ahg340908 | glucan synthase-like 10 |
| 10.4881 |
Ahg470391 | Transducin family protein / WD-40 repeat family protein |
| 16.9706 |
Ahg495156 | CLPC homologue 1 |
| 17.7482 |
Ahg328503 | ENTH/ANTH/VHS superfamily protein |
| 18.5203 |
Ahg492552 | glutamate-cysteine ligase |
| 22.0907 |
Ahg939446 | transducin family protein / WD-40 repeat family protein |
| 24.98 |
Ahg475320 | ABC-2 and Plant PDR ABC-type transporter family protein |
| 30.4467 |
Ahg332145 | Phosphatidate cytidylyltransferase family protein |
| 30.4959 |
Ahg485659 | monodehydroascorbate reductase 1 |
| 33.3617 |
Ahg925338 | cytochrome P450, family 89, subfamily A, polypeptide 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|