Detail



ID : Ahg485417

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485417|fgenesh2_kg.5__1409__AT3G50690.1
Sequence
ATGGATGAGA TTTGGGAAAA AGTTGTGGAA GCGGCTCTAG ATGGTCAAAC AGATAGGTTA GCTACACGGA CGCTAACACT TGATGGTGCT GTGAAACGCG TTCATGGACG TTTACCACCG CCCAATGTTC TCGAGAAGTT TCAGAATCTT CAGCATCTTT CTATAGCTAA CATCGGTATT TCTTCGCTGG AGCAGTTTCC TAGACTTGGT AATTTACAGA AGCTAATCTT ATCTGATAAT CGGATCACTG TTGGCTTGGA GTTTCTTGTT GAAGCTGGGC TTGATTCGTT GCGTGATTTG GATTTGTCTA ATAACCGGAT CCAGTTTGTT GAGGATCTAG CTCCTTTGGC GGAGTTGAAG CTTGTGTCTC TTGATCTGTA TGAGTGTCCT GTCACTAGGG TTAAGGATTA TCGATCTAGG GTTTTTGGGT TGATTAAAAC TTTGAAGTAT TTAGATAAGA CTGATGCTGA AGGGAATGAG AGGCCTGAAT CTGATGATGA AGATGATGAG GAAGATGAGG AGGATGAAGA GGAGGAGGAG GAGGGTGATG AAGAGGATCC TGGAATTGGG GAGGTTGATG GAGATGAAAG AGCAGAGGCT CCTAGGCTGA GTAATGGGCA TAGTGAAAGG CTAGATGGTG TTGTTGATGT TGATGAGGAT GAAGAGAGTG ATGCAGAGGA TGATGAGTCA GAGCAGGCTA CTGGAGTGAA CGGGACGAGT TATCGGCCTA ATGGATCCCG TCTTCAAGCT GTAAATGGGG AAGAAGTAGG GGAAGATGAT GGGGATGATA GTGAGTCTGG TGAGGAGGAA GTAGGGGAAG ATAATGATGT GGTTGAGGTG CATGAGATTG AAGATAGTGA TAATGAGGAA GATGGGGTTG ATGATGAAGA AGATGATGAG GAGGATGAGG AGGAAGAGGA AGTTGATAAT GATGATCGTG GTCTTGGTGG GTCAGGGAGC ACAGGCAGGT TGATGAATGC AGGAGAGATT GATGGGCATG AGCAAGGGGA TGACGATGAA GACGGTGATG GTGAGACTGG GGAAGATGAC CAAGGGGTTG AGGACGATGG AGAGTTTGCG GATGAAGATG ATGATGTTGA AGAGGAGGAT GAAGAATCCG GTGAAGGGTA CCTTGTTCAG CCAATCTCTC AAGTGGAAGA TCATGATGCT GTGGGTAGTG ACATCGAGCC GATCAATGAG GACAATGATC CAGATGAAGA AGAAGAAGTC GAAGATGACC TGCCAATCCC TGACAAGTCC TTGCCATCAT CATCTCGCCC AAAGAGAAAA CGAGATGACG ATGATGATGG TGAGGACGAT GACGATGATG ATGATGATTG TTGATGATAC AGATCAGAAT CTCTAGTTTG ATGAGTTTTA GATGGAAGAA AAGCTCTGCT CCTTCTGGAT TAAGGCGGCT ATATATGAAT GTTCAAATGT CAGTTATGGT CAGGCTGGTG GATTTTCAAA TGACGGTTAC TCAGCTTGGA TTTACCGCCT TTTTAGAAAC CCCACTTTAT GGAGGGAAAG GAAAAACACA AACACAAAGG AAGAGTTTCG AGACCTTGTT TCTCTGTTAG AGGGTCTTGT AAGAATGCTT GTGGATAAAT CTTTTTGAGT TATATCGTCT TTTGTTTTAC ATCC 
Length1644
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14413061.. 14415261
Download Sequence
A.thaliana
AGI-codeAT3G50690.1
DescriptionLeucine-rich repeat (LRR) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
21.4942 Ahg932721
24.1868 Ahg323999 Structural maintenance of chromosomes (SMC) family protein
28.6182 Ahg473061 homeobox-1
29.2916 Ahg355725 RNA-binding (RRM/RBD/RNP motifs) family protein
32.5883 Ahg484373 Regulator of chromosome condensation (RCC1) family protein
34.9857 Ahg494576 Homeodomain-like transcriptional regulator
36.0555 Ahg492144 DEK domain-containing chromatin associated protein
37.6165 Ahg476852 RNA-binding (RRM/RBD/RNP motifs) family protein
43.4741 Ahg470832 RNAligase
45.6946 Ahg938803 P-loop containing nucleoside triphosphate hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression