Detail



ID : Ahg944834

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944834|scaffold_701063.1
Sequence
TAAGTCAAAC AAAGAAAAAA ATGGATCTCT TCTTGATTAT AGCCGCTTTG GTAGCGGCTG CAGCCTTCTT TTTCCTCCGT AGCACGACCA AGAAATCTCT CCGGCTACCT CCGGGACCAA AAGGTCTTCC TATTATAGGA AACCTTCACC AGATGGAGAA ATTCAATCCA CAACACTTCC TTTTCCGTCT ATCCAAGCTA TACGGCCCGA TTTTCACGAT GAAAATCGGA GGCCGTCGCC TAGCGGTGAT CTCCTCGGCC GAGCTAGCCA AGGAGCTACT CAAGACTCAA GACCTCAACT TCACCGCTCG TCCTCTCTTG AAAGGTCAAC AAACGATGTC GTATCAAGGC CGTGAGCTCG GTTTCGGACA GTACACCGCC TACTACCGTG AGATGAGGAA GATGTGTATG GTGAACCTCT TCAGCCCAAA CCGTGTCGCA AGTTTCAGAC CGGTTAGAGA AGAAGAGTGC CAACGGATGA TGGACAAGAT CTACAAAGCC GCTGATCAAT CAGGCACCGT TGATCTAAGT GAGCTCCTCT TGTCTTTCAC CAACTGTGTC GTATGTAGAC AAGCTTTTGG GAAACGGTAC AATGAGTACG GTACAGAGAT GAAGAGATTC ATAGACATCT TGTACGAGAC GCAAGCACTT TTGGGCACTC TGTTTTTCTC CGACCTCTTT CCTTATTTTG GATTCCTTGA CAACCTCACT GGTCTTAGTG CGCGTCTCAA GAAAGCTTTT AAGGAGCTTG ACACTTACCT TCAAGAACTT CTAGACGAGA CTCTTGACCC TAACCGCCCT AAACAAGAAA CAGAGAGTTT CATTGATCTT TTGATGCAGA TCTACAAAGA CCAACCTTTC TCCATCAAAT TTACTCACGA AAATGTCAAG GCCATGATAT TGGATATTGT TGTGCCGGGA ACTGACACGG CGGCTGCGGT GGTGGTATGG GCCATGACTT ACCTTATAAA GTACCCTGAA GCGATGAAGA AAGCTCAAGA CGAAGTGAGG AATGTGATAG GCGACAAAGG ATATGTCTCG GAAGAAGATA TACCTAATCT CCCTTACCTC AAGGCAGTCA TCAAGGAGTC TCTTCGGCTC GAACCAGTCA TCCCCATTCT TCTACACAGA GAAACTATCG CAGACGCAAA GATCGGTGGC TATGATATCC CGGCCAAGAC CATCATTCAG GTGAACGCGT GGGCGGTTTC TCGTGACACA GCCGCGTGGG GAGACAACCC TAATGAGTTC ATTCCAGAGA GGTTCATGAA GGAGCACAAA GGAGTGGACT TCAAGGGCCA AGATTTTGAG CTCCTACCTT TCGGGTCGGG CCGGAGAATG TGCCCGGCCA TGCATCTTGG GATCGCAATG GTAGAGATAC CTTTCGCTAA CCTTCTCTAC AAATTTGACT GGAGTCTACC TAAAGGGATT AAACCAGAGG ATATAAAGAT GGACGTCATG ACTGGACTCG CTATGCACAA GAAAGAACAC CTCGTCCTTG CACCAACGAA ACACATCTGA TGCTATATAT ATCATTAGGA CGTTTCTGCT GGTAGATATG GCGTGACCAA TGGTTGTTTT TCATTG 
Length1586
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4052932.. 4054611
Download Sequence
A.thaliana
AGI-codeAT4G31500.1
Descriptioncytochrome P450, family 83, subfamily B, polypeptide 1
TAIR curator summaryEncodes an oxime-metabolizing enzyme in the biosynthetic pathway of glucosinolates. Is required for phytochrome signal transduction in red light. Mutation confers auxin overproduction.
Alias[ATR4][CYP83B1][RED1][RNT1][SUR2][ALTERED TRYPTOPHAN REGULATION 4]["cytochrome P450, family 83, subfamily B, polypeptide 1"][RED ELONGATED 1][RUNT 1][SUPERROOT 2]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg482003 glutathione S-transferase PHI 9
6 Ahg491698 Class I glutamine amidotransferase-like superfamily protein
6.245 Ahg492552 glutamate-cysteine ligase
6.48074 Ahg472690 glutathione S-transferase tau 13
7.07107 Ahg926547 sucrose-proton symporter 1
8 Ahg926796 sulfotransferase 16
8.48528 Ahg488005 NADP-malic enzyme 2
8.66025 Ahg480895 Tyrosine transaminase family protein
13.0384 Ahg312977 catalase 1
13.1909 Ahg471986 D-3-phosphoglycerate dehydrogenase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression